- Overview
- 2D SDS PAGE
- Isoelectric Focusing
- 1D SDS PAGE
Overview
2D SDS PAGE
Isoelectric Focusing
Isoelectric Focusing to Compare Isoform Isoelectric Points
Post-translational modifications (PTM), such as phosphorylation, glycosylation, and acetylation, shift the isoelectric points (pI) of proteins. The proteins are first dissolved in a buffer that does not have an effect on the intrinsic charge of the protein. Samples are loaded on a special acrylamide gel containing ampholytes which establish a pH gradient along the length of the gel. Once an electric field is applied, the proteins in the sample migrate to the pH at which they no longer have a net charge and stop migrating in the electric field. Thus, the proteins are separated by pI, and any shifts in pI can easily be visualized using isoelectric focusing (IEF) in a single dimension. This method is especially useful when looking at purified protein products.
Kendrick Labs uses Invitrogen pH 3-10 IEF gels to perform isoelectric focusing of protein samples. Serva IEF standards are loaded alongside the samples to compare pH ranges of the isoforms. The gels can be used to see how PTMs alter the pI of a protein of interest. This method is useful to compare lot-to-lot variability for IgG samples, protein isoforms of innovator versus biosimilar products, and much more. In the above example, Sample A shows clear discrete bands ranging from a pI if 5.3-6.0, while Sample B shows a more diffuse pattern with a pI range from 6.9-7.4.