-
- Trivedi, R., Knopf, B., Rakoczy, S., Manocha, G. D., Brown-Borg, H., and Jurivich, D. A. (2024) Disrupted HSF1 regulation in normal and exceptional brain aging. Biogerontology 25, 147-160 10.1007/s10522-023-10063-w.
- Bloch, S., Nejman-Falenczyk, B., Licznerska, K., Dydecka, A., Topka-Bielecka, G., Necel, A. et al. (2024) Complex effects of the exo-xis region of the Shiga toxin-converting bacteriophage Phi24(B) genome on the phage development and the Escherichia coli host physiology. J Appl Genet 65, 191-211 10.1007/s13353-023-00799-z.
- Prochazkova, L., Remias, D., Nedbalova, L., and Raymond, J. A. (2023) A DUF3494 ice-binding protein with a root cap domain in a streptophyte glacier ice alga. Front Plant Sci 14, 1306511 10.3389/fpls.2023.1306511.
- Jayathirtha, M., Jayaweera, T., Whitham, D., Sullivan, I., Petre, B. A., Darie, C. C. et al. (2023) Two-Dimensional-PAGE Coupled with nLC-MS/MS-Based Identification of Differentially Expressed Proteins and Tumorigenic Pathways in MCF7 Breast Cancer Cells Transfected for JTB Protein Silencing. Molecules 28, 10.3390/molecules28227501.
- Jayathirtha, M., Jayaweera, T., Whitham, D., Petre, B. A., Neagu, A. N., and Darie, C. C. (2023) Two-Dimensional Polyacrylamide Gel Electrophoresis Coupled with Nanoliquid Chromatography-Tandem Mass Spectrometry-Based Identification of Differentially Expressed Proteins and Tumorigenic Pathways in the MCF7 Breast Cancer Cell Line Transfected for Jumping Translocation Breakpoint Protein Overexpression. Int J Mol Sci 24, 10.3390/ijms241914714.
- Dube, D. K., Dube, S., Abbott, L., Elsekaily, O., Randhawa, S. S., Sanger, J. M. et al. (2023) Tropomyosin Isoform Diversity in the Cynomolgus Monkey Heart and Skeletal Muscles Compared to Human Tissues. Biochem Res Int 2023, 1303500 10.1155/2023/1303500.
- Davies, S., Lujan, K. S., Rappaport, E. J., Valenzuela, C. F., and Savage, D. D. (2023) Effect of moderate prenatal ethanol exposure on the differential expression of two histamine H3 receptor isoforms in different brain regions of adult rat offspring. Front Neurosci 17, 1192096 10.3389/fnins.2023.1192096.
- Coates-Park, S., Lazaroff, C., Gurung, S., Rich, J., Colladay, A., O’Neill, M. et al. (2023) Tissue inhibitors of metalloproteinases are proteolytic targets of matrix metalloproteinase 9. Matrix Biol 123, 59-70 10.1016/j.matbio.2023.09.002.
- Clermont, K., Graham, C. J., Lloyd, S. W., Grimm, C. C., Randall, J. J., and Mattison, C. P. (2023) Proteomic Analysis of Pecan (Carya illinoinensis) Nut Development. Foods 12, 10.3390/foods12040866.
- Aslebagh, R., Whitham, D., Channaveerappa, D., Lowe, J., Pentecost, B. T., Arcaro, K. F. et al. (2023) Proteomics analysis of human breast milk by two-dimensional polyacrylamide gel electrophoresis (2D-PAGE) coupled with mass spectrometry to assess breast cancer risk. Electrophoresis 44, 1097-1113 10.1002/elps.202300040.
- Wiley, L. A., E. M. Binkley, A. P. DeLuca, G. Workalemahu, N. J. Tatro, M. A. Luse, … and E. M. Stone, Autoimmune retinopathy mimicking heritable retinal degeneration in a patient with common variable immune deficiency. Retinal cases & brief reports, 2022. 16(1), p. 111-117.
- Wang, B., D. Li, Y. Ilnytskyy, I. Kovalchuk, and O. Kovalchuk, A miR-34a-guided, tRNAiMet-derived, piR_019752-like fragment (tRiMetF31) suppresses migration and angiogenesis of breast cancer cells via targeting PFKFB3. Cell death discovery, 2022. 8(1), p. 1-13.
- Nardi, J., L. A. Miller, H. M. Robertson, and P. M. Yau, Segmental pairs of dermal secretory cells release proteins into the hemolymph at the larval-pupal molt. Developmental Biology, 2022. 483, p. 107-111.
- Kim, S. M., B. Studnitzer, and A. Esser-Kahn, Heat Shock Protein 90’s Mechanistic Role in Contact Hypersensitivity. The Journal of Immunology, 2022.
- Hu, M., A. D. Doyle, K. M. Yamada, and A. B. Kulkarni, Visualization of trigeminal ganglion sensory neuronal signaling regulated by Cdk5. Cell reports, 2022. 38(10), p. 110458.
- Doty, M., S. Yun, Y. Wang, M. Hu, M. Cassidy, B. Hall, and A. B. Kulkarni, Integrative Multiomic Analyses of Diabetic Neuropathic Pain in Dorsal Root Ganglia: Proteomics, Phospho-proteomics, and Metabolomics. 2022.
- Clark, R., V. Bondu, P. C. Simons, L. Shevy, E. F. Castillo, S. Young, … and T. Buranda, G-Trap Assay I: Small GTPases as sensitive immune response biomarkers for active bacteremia. bioRxiv, 2022.
- Awasthi, V., H. Gali, A. F. Hedrick, H. Da, V. Eeda, and D. Jain, Positron Emission Tomography (PET) with 18F-FGA for Diagnosis of Myocardial Infarction in a Coronary Artery Ligation Model. Molecular imaging, 2022.
- Alharbi, B. M., A. Bugshan, A. Almozel, R. Alenzi, A. Bouchama, T. Khatlani, … and S. S. Malik, HSPA1B is the Dominant Partner in the HSPA1A/HSPA1B Mediated Proteotoxic Stress Response in Placenta-Derived Stem Cells. 2022.
- Tabatabai, B., and V. Sitther, Abiotic Stress Response-Associated Proteins in A Salt Tolerant Strain of the Cyanobacterium Fremyella Diplosiphon: A Potential Biofuel Agent. Journal of Construction Project Management and Innovation, 2021. 11(1), p. 142-150.
- Liu, S., et al., Proteomic Analysis Identifies Dysregulated Proteins in Butanol-Tolerant Gram-Positive Lactobacillus mucosae BR0713-33. ACS Omega, 2021. 6(5): p. 4034-4043.
- Gazzinelli-Guimaraes , P.H., et al., House dust mite sensitization drives cross-reactive immune responses to homologous helminth proteins. PLoS Pathog, 2021. 17(3): p. e1009337.
- Dube, S., et al., Identification of a novel TPM4 isoform transcript and comparison to the expression of other tropomyosin isoforms in bovine cardiac and skeletal muscles. Int J Biochem Nol Biol, 2021. 12(1): p. 17-34.
- Dube, D. K., J. Wang, Y. Fan, S. Dube, L. Abbott, J. M. Sanger, … and J. W. Sanger, Effect of MG‐132 on myofibrillogenesis and the ubiquitination of GAPDH in quail myotubes. Cytoskeleton, 2021. 78(8), 375-390.
- Dollery, S. J., D. V. Zurawski, E. K. Gaidamakova, V. Y. Matrosova, J. K. Tobin, T. J. Wiggins, … and G. J. Tobin, , Radiation-Inactivated Acinetobacter baumannii Vaccine Candidates. Vaccines, 2021. 9(2), p. 96.
- Tasaki, K. A novel thermal hydrolysis process for extraction of keratin from hog hair for commercial applications. Waste Management. 2020 Jan 17;104:33-41.
- Noel, O. F., X. Chu, A. D. Patterson, M. A. Edwards, C. D. Still and G. S. Gerhard (2020). “Roux-en-Y Gastric Bypass Surgery Has Early Differential Effects on Bile Acids and the Levels of Complement Component 3 and Acylation-Stimulating Protein.” Obesity Surgery.
- Kendrick, N., G. Powers, J. Johansen, M. Hoelter, A. Koll, S. Carlson, D. Channaveerappa, and C.C. Darie. Preparation of a phosphotyrosine-protein standard for use in semiquantitative western blotting with enhanced chemiluminescence. PloS one. 2020 June 18; 15(6): e0234645.
- Djuranovic P. S., J. Erath, R. J. Andrews, P. O. Bayguinov, J. J. Chung, D. L. Chalker, J. A. Fitzpatrick, W. N. Moss, P. Szczesny and S. Djuranovic, “Plasmodium falciparum translational machinery condones polyadenosine repeats.” 2020. Elife 9.
- Dube, D. K., S. Dube, L. Abbott, O. Elsekaily, J. W. Sanger, J. M. Sanger and B. J. Poiesz (2020). “Sarcomeric TPM3 expression in human heart and skeletal muscle.” Cytoskeleton 77(8): 313-328.
- Burckhardt, R.M., C.M. VanDrisse, A.C. Tucker, and J.C. Escalante-Semerena.
New AMP-forming acid:CoA ligases from Streptomyces lividans, some of which are posttranslationally regulated by reversible lysine acetylation.
Molecular Microbiology. 2020 Jan;113(1):253-269. - Alyethodi, R. R., S. Karthik, K. Muniswamy, S. K. Ravi, P. Perumal, D. Bhattacharya, P. A. Bala, A. K. De, T. Sujatha, J. Sunder and A. Kundu (2020). “Assessment of Protein Profiles of RNAlater Stored and Fresh PBMC Cells Using Different Protein Extraction Buffers.” The Protein Journal 39(3): 291-300.
- Schilder, R.J. and H. Stewart. Parasitic Gut Infection in Libellula Pulchella Causes Functional and Molecular Resemblance of Dragonfly Flight Muscle to Skeletal Muscle of Obese Vertebrates. The Journal of Experimental Biology. 2019 Mar 1;222(5).
- Lux, J.C., D.Channaveerappa, R. Aslebagh, T.A. Heintz, M. McLerie, B.K. Panama, and C.C. Darie. Identification of dysregulation of atrial proteins in rats with chronic obstructive apnea using two-dimensional polyacrylamide gel electrophoresis and mass spectrometry. Journal of Cellular and Molecular Medicine. 2019 Apr;23(4):3016-3020.
- Lellis, A. D., R. M. Patrick, L. K. Mayberry, A. Lorence, Z. C. Campbell, J. L. Roose, … & K.S. Browning, eIFiso4G augments the synthesis of specific plant proteins involved in normal chloroplast function. Plant physiology, 2019. 181(1), p. 85-96.
- Kendrick, N., C.C. Darie, M. Hoelter, G. Powers, and J. Johansen. 2D SDS PAGE in Combination with Western Blotting and Mass Spectrometry is a Robust Method for Protein Analysis with Many Applications. Advances in Experimental Medicine and Biology. 2019 1140: p.563-574.
- Jurivich, D.A., G.D. Manocha, R. Trivedi, M. Lizakowski, S. Rakoczy, H. Brown-Borg. Multifactorial Attenuation of the Murine Heat Shock Response With Age. The Journals of Gerontology: Series A, glz204. 2019 Oct 14.
- Gandbhir, O. and P. Sundaram. ‘Amytrapper’, a Novel Immobilized Sepharose API Matrix, Removes Amyloid-β from Circulation in vitro. Journal of Alzheimers Disease Reports. 2019 Feb 4;3(1):19-29.
- Fathabad, S. G., B. Tabatabai, S. Jafar, and V. Sitther, Microcystin levels in selected cyanobacteria exposed to varying salinity. Journal of water resource and protection, 2019. 11(4), p. 395.
- Vogler B.W., S.R. Starkenburg, N. Sudasinghe, J.Y. Schambach, J.A. Rollin, S. Pattathil,and A.M. Barry. Characterization of plant carbon substrate utilization by Auxenochlorella protothecoides. Algal Research. 2018 Sept (37-48).
- Sheehan, M. M., M.S. Magaraci, I.A. Kuznetsov, J.A. Mancini, G. Kodali, C. Moser, … & B.Y. Chow, Rational construction of compact de novo-designed biliverdin-binding proteins. Biochemistry, 2018. 57(49), p. 6752-6756.
- Rao, G., S. Dubez, G. Nkepang, J. Xu, H. Yari, H. Houson, C. Tang, and V. Awasthi. Ubiquitin Receptor RPN13 Mediates the Inhibitory Interaction of Diphenyldihalokentone CLEFMA and EF23 With the 26S Proteasome. Frontiers in Chem. 2018 Sept 10;6.
- Rahman H., J. Carneglia, M. Lausten, M. Robertello, J. Choy, and J. Golin. Robust, pleiotropic drug resistance 5 (Pdr5)-mediated multidrug resistance is vigorously maintained in Saccharomyces cerevisiae cells during glucose and nitrogen limitation. FEMS Yeast Res. 2018 Jun 1;18(4).
- Lopez-Coral A., A.C. Stritz, and P.L. Tuma.
A Serine/Threonine Kinase 16-Based Phospho-Proteomics Screen Identifies WD Repeat Protein-1 As A Regulator of Consitituitive Secretion.
Sci Rep. 2018 Aug 29;8(1). - Hergenroeder G.W., J.B. Redell, H.A. Choi, L. Schmitt, W. Donovan, G.E. Francisco, K. Schmitt, A.N. Moore, and P.K. Dash. Increased Levels of Circulating Glial Fibrillary Acidic Protein and Collapsin Response Mediator Protein-2 Autoantibodies in the Acute Stage of Spinal Cord Injury Predict the Subsequent Development of Neuropathic Pain. J Neurotrauma. 2018 Jul 5. (Epub ahead of print)
- Giles, A.R., J.J. Sims, K.B. Turner, L. Govindasamy, M.R. Alvira, M. Lock, J.M. Wilson. Deamidation of Amino Acids on the Surface of Adeno-Associated Virus Capsids Leads to Charge Heterogeneity and Altered Vector Function. Molecular Therapy. 2018 Dec 5;26(12):2848-2862.
- Dube, D.K., S. Dubez, R. Shrestha, L. Abbott, S. Randhawa, V. Muthu, Y. Fan, J. Wang, J.M. Sanger, J.W. Sanger, and B.J. Poiesz.
Qualitative and quantitative evaluation of TPM transcripts and proteins in developing striated chicken muscles indicate TPM4alpha is the major sarcomeric cardiac tropomyosin from early embroyonic life to adulthood.
2018;1-13. - Bastounis, E.E., Y.T. Yeh, and J.A. Theriot Matrix stiffness modulates infection of endothelial cells by Listeria monocytogenes via expression of cell surface vimentin. Mol Biol Cell. 2018 Jul 1;29(13):1571-1589.
- Aslebagh R, D.Channaveerappa, K.F. Arcaro, and C. Darie. Comparative two-dimensional polyacrylamide gel electrophoresis (2D-PAGE) of human milk to identify dysregulated proteins in breast cancer. 2018 May 13.
- Vedula, P., S. Kurosaka, N.A. Leu, Y.I. Wolf, S.A. Shabalina, J. Wang, S. Sterling, D.W. Dong, and A. Kashina. Diverse functions of closely homologous actin isoforms are defined by their nucleotide, rather than their amino acid sequence. 2017 Dec 15;6.
- Wang, J., X. Han, N.A. Leu, S. Sterline, S. Kurosaka, M. Fina, V.M. Lee, D.W. Dong, J.R. Yates, and A. Kashina. Protein arginylation targets alpha synuclein, facilitates normal brain health, and prevents neurodegeneration. Sci Rep. 2017; 7: 11323.
- Almutairi, M.M., M.S. Svetlov, D.A. Hansen, N.F. Khabibullina, D. Klepacki, H. Kang, D.H. Sherman, N. Vazquez-Laslop, Y.S. Polikanov, and A.S. Mankin. Co-produced natural ketaloides methmycin and pikromycin inhibit bacterial growth by preventing synthesis of a limited number of proteins. Nucleic Acid Research. 2017 Sep 19:45 (16):9573-9528.
- Tabatabai, B., A.S. Arumanayagam, O. Enitan, A. Mani, S.S. Natarajan, and V. Sitther. Overexpression of hlyB and mdh genes confers halotolerance in Fremylella diplosiphon, a freshwater cyanobacterium. Enzyme and Microbial Technology 2017. 103:p 12-17.
- Pillay, S., W. Zou, F. Cheng, A.S. Puschnik, N.L. Meyer, S.S. Ganaie, X. Deng, J.E. Wosen, O. Davulcu, Z. Yan, J.F. Engelhardt, K.E. Brown, M.S. Chapman, J. Qiu, and J.E. Carett. AAV serotypes have distinctive interactions with domains of cellular receptor AAVR. Journal of Virology. 2017.
- Ou, L., M.J. Przybilla, and C.B. Whitley, Proteomic analysis of mucopolysaccharidosis I mouse brain with two-dimensional polyacrylamide gel electrophoresis. Molecular genetics and metabolism, 2017. 120(1-2): p.101-110.
- Lopez, G. and R.E. Pollock, Evaluating the Effect of HDAC8 Inhibition in Malignant Peripheral Nerve Sheath Tumors. Methods in molecular biology, 2017. 1510: p. 365-374.
- Huwyler, C., N. Heiniger, B.B. Chomel, M. Kim, R.W. Kasten, and J.E. Koehler. Dynamics of Co-Infection with Bartonella henselae Genotypes I and II in Naturally Infected Cats: Implications for Feline Vaccine Development. Microbial Ecology, 2017 Aug 74 (2): p. 474-484.
- Hanft, L.M., C.A. Emter, and K.S. McDonald. Cardiac myofibrillar contactile properties during the progression from hypertension to decompensated heart failure. Am J Physiol Heart Circ Physiol. 2017. 1313 (1).
- Dube, D.K., S. Dube, L. Abbott, J. Wang, Y. Fan, R. Alshiekh-Nasany, K.K. Shah, A.P. Rudloff, B.J. Poiesz, J.M. Sanger, and J.W. Sanger. Identification, characterization, and expression of sarcomeric tropomyosin isoforms in zebrafish,Cytoskeleton, 2017. 74(3): p. 125-142.
- Connor, D. E., G. V. Chaitanya, P. Chittiboina, P.McCarthy, L.K. Scott, L. Schrott, A. Minagar, A. Nanda, and J.S. Alexander. Variation in the cerebrospinal fluid proteome following traumatic brain injury and subarachnoid hemorrhage. Pathophysiology, 2017.
- Bastounis, E. E., J. A. Theriot, and Y. Yeh, Cell surface vimentin is involved in matrix stiffness dependent infection of endothelial cells by Listeria monocytogenes. In Molecular Biology of the Cell, 2017, January. (Vol. 28). 8120 Woodmont Ave, Ste 750, Bethesda, MD 20814-2755 USA: Amer Soc Cell Biology.
- Zeng, Y., X.P. Hu, and S.J. Suh, Characterization of Antibacterial Activities of Eastern Subterranean Termite, Reticulitermes flavipes, against Human Pathogens. PLoS ONE, 2016. 11(9): p. e0162249.
- Wang, J., Y. Tian, Z. Zhou, L. Zhang, W. Zhang, M. Lin, & M. Chen, Identification and functional analysis of RelA/SpoT homolog (RSH) genes in Deinococcus radiodurans. Journal of microbiology and biotechnology, 2016. 26(12), p. 2106-2115.
- Urasaki, Y., G. Pizzorno, and T.T. Le, Chronic Uridine Administration Induces Fatty Liver and Pre-Diabetic Conditions in Mice. PLoS ONE, 2016. 11(1): p. e0146994.
- Nardi, J.B., C.M. Bee, L.A. Miller, B.S. Imai, and P.M. Yau, Segmental pairs of giant insect cells discharge presumptive immune proteins at each larval molt. Developmental biology, 2016. 413(2): p. 199-206.
- Jana, B., L. Tao, and I. Biswas, Strain-Dependent Recognition of a Unique Degradation Motif by ClpXP in Streptococcus mutans. mSphere, 2016. 1(6): p. e00287-16.
- Huang, H., K. Konduru, V. Solovena, Z.H. Zhou, N. Kumari, K. Takeda, S. Nekhai, S. Bavari, G.G. Kaplan, and S. Dhawan. Therapeutic potential of the heme oxygenase-1 inducer hemin against Ebola virus infection. Current Trends in Immunology, 2016. 17: p. 117-123.
- Hergenroeder, G.W., A.N. Moore, K.M. Schmitt, J.B. Redell, and P.K. Dash, Identification of autoantibodies to glial fibrillary acidic protein in spinal cord injury patients. Neuroreport, 2016. 27(2): p. 90-3.
- Frayne, E.G., Conserved mechanism of action of a phosphate analogue in cultured cells. Molecular and cellular biochemistry, 2016. 415(1-2): p. 111-7.
- Emelyanova, L., Z. Ashary, M. Cosic, U. Negmadjanov, G. Ross, F. Rizvi, S. Olet, D. Kress, J. Sra, A.J. Tajik, E.L. Holmuhamedov, Y. Shi, and A. Jahangir, Selective downregulation of mitochondrial electron transport chain activity and increased oxidative stress in human atrial fibrillation. American journal of physiology. Heart and circulatory physiology, 2016. 311(1): p. H54-63.
- Dube, D.K., S. Dube, L. Abbott, R. Alshiekh-Nasany, C. Mitschow, and B.J. Poiesz, Cloning, Sequencing, and the Expression of the Elusive Sarcomeric TPM4α Isoform in Humans. Molecular biology international, 2016: p. 3105478.
- Xayarath, B., F. Alonzo, 3rd, and N.E. Freitag, Identification of a peptide-pheromone that enhances Listeria monocytogenes escape from host cell vacuoles. PLoS pathogens, 2015. 11(3): p. e1004707.
- Weber, G.F., Molecular Analysis of a Recurrent Sarcoma Identifies a Mutation in FAF1. Sarcoma, 2015. 2015: p. 839182.
- Venkatasubramanian, S., R. Dhiman, P. Paidipally, S.S. Cheekatla, D. Tripathi, E. Welch, A.R. Tvinnereim, B. Jones, D. Theodorescu, P.F. Barnes, and R. Vankayalapati, A rho GDP dissociation inhibitor produced by apoptotic T-cells inhibits growth of Mycobacterium tuberculosis. PLoS pathogens, 2015. 11(2): p. e1004617.
- Tome, M.E., C.P. Schaefer, L.M. Jacobs, Y. Zhang, J.M. Herndon, F.O. Matty, and T.P. Davis, Identification of P-glycoprotein co-fractionating proteins and specific binding partners in rat brain microvessels. Journal of neurochemistry, 2015. 134(2): p. 200-10.
- Takeda, K., R. Adhikari, K.M. Yamada, and S. Dhawan, Hemin activation of innate cellular response blocks human immunodeficiency virus type-1-induced osteoclastogenesis. Biochemical and biophysical research communications, 2015. 464(1): p. 7-12.
- Shelby, S.J., K.L. Feathers, A.M. Ganios, L. Jia, J.M. Miller, and D.A. Thompson, MERTK signaling in the retinal pigment epithelium regulates the tyrosine phosphorylation of GDP dissociation inhibitor alpha from the GDI/CHM family of RAB GTPase effectors. Experimental eye research, 2015. 140: p. 28-40.
- Raval, K.K., R. Tao, B.E. White, W.J. De Lange, C.H. Koonce, J. Yu, P.S. Kishnani, J.A. Thomson, D.F. Mosher, J.C. Ralphe, and T.J. Kamp, Pompe disease results in a Golgi-based glycosylation deficit in human induced pluripotent stem cell-derived cardiomyocytes. The Journal of biological chemistry, 2015. 290(5): p. 3121-36.
- Orelle, C., E.D. Carlson, T. Szal, T. Florin, M.C. Jewett, and A.S. Mankin, Protein synthesis by ribosomes with tethered subunits. Nature, 2015. 524(7563): p. 119-24.
- Ngounou Wetie, A.G., K.L. Wormwood, L. Charette, J.P. Ryan, A.G. Woods, and C.C. Darie, Comparative two-dimensional polyacrylamide gel electrophoresis of the salivary proteome of children with autism spectrum disorder. Journal of cellular and molecular medicine, 2015.19(11): p. 2664-78.
- Lopez, G., K.L. Bill, H.K. Bid, D. Braggio, D. Constantino, B. Prudner, A. Zewdu, K. Batte, D. Lev, and R.E. Pollock, HDAC8, A Potential Therapeutic Target for the Treatment of Malignant Peripheral Nerve Sheath Tumors (MPNST). PLoS ONE, 2015. 10(7): p. e0133302.
- Kim, S.Y., Q. Zhang, R. Brunmeir, W. Han, and F. Xu, SIRT1 Interacts with and Deacetylates ATP6V1B2 in Mature Adipocytes. PLoS ONE, 2015. 10(7): p. e0133448.
- Karr, T.L. and J.R. Walters, Panning for sperm gold: Isolation and purification of apyrene and eupyrene sperm from lepidopterans. Insect biochemistry and molecular biology, 2015. 63: p. 152-8.
- Jovasevic, V., K.A. Corcoran, K. Leaderbrand, N. Yamawaki, A.L. Guedea, H.J. Chen, G.M. Shepherd, and J. Radulovic, GABAergic mechanisms regulated by miR-33 encode state-dependent fear. Nature neuroscience, 2015. 18(9): p. 1265-71.
- Johlfs, M.G., P. Gorjala, Y. Urasaki, T.T. Le, and R.R. Fiscus, Capillary Isoelectric Focusing Immunoassay for Fat Cell Differentiation Proteomics. PLoS ONE, 2015. 10(7): p. e0132105.
- Jaramillo, M.C., M.M. Briehl, I. Batinic-Haberle, and M.E. Tome, Manganese (III) meso-tetrakis N-ethylpyridinium-2-yl porphyrin acts as a pro-oxidant to inhibit electron transport chain proteins, modulate bioenergetics, and enhance the response to chemotherapy in lymphoma cells. Free radical biology & medicine, 2015. 83: p. 89-100.
- Charoensuksai, P., P. Kuhn, L. Wang, N. Sherer, and W. Xu, O-GlcNAcylation of co-activator-associated arginine methyltransferase 1 regulates its protein substrate specificity. The Biochemical journal, 2015. 466(3): p. 587-99.
- Bondu, V., R. Schrader, M.A. Gawinowicz, P. McGuire, D.A. Lawrence, B. Hjelle, and T. Buranda, Elevated cytokines, thrombin and PAI-1 in severe HCPS patients due to Sin Nombre virus. Viruses, 2015. 7(2): p. 559-89.
- Annis, D.S., H. Ma, D.M. Balas, K.T. Kumfer, N. Sandbo, G.K. Potts, J.J. Coon, and D.F. Mosher, Absence of Vitamin K-Dependent gamma-Carboxylation in Human Periostin Extracted from Fibrotic Lung or Secreted from a Cell Line Engineered to Optimize gamma-Carboxylation. PLoS ONE, 2015. 10(8): p. e0135374.
- Urasaki, Y., G. Pizzorno, and T.T. Le, Uridine affects liver protein glycosylation, insulin signaling, and heme biosynthesis. PLoS ONE, 2014. 9(6): p. e99728.
- Trachtenberg, S., P. Schuck, T.M. Phillips, S.B. Andrews, and R.D. Leapman, A structural framework for a near-minimal form of life: mass and compositional analysis of the helical mollicute Spiroplasma melliferum BC3. PLoS ONE, 2014. 9(2): p. e87921.
- Sueyoshi, R., K.M. Woods Ignatoski, M. Okawada, and D.H. Teitelbaum, Distraction-induced intestinal growth: the role of mechanotransduction mechanisms in a mouse model of short bowel syndrome. Tissue engineering. Part A, 2014. 20(3-4): p. 830-41.
- Sohn, E.H., A. Khanna, B.A. Tucker, M.D. Abramoff, E.M. Stone, and R.F. Mullins, Structural and biochemical analyses of choroidal thickness in human donor eyes. Investigative ophthalmology & visual science, 2014. 55(3): p. 1352-60.
- Palomar-Pardavé, M., S. Corona-Avendaño, M. Romero-Romo, G. Alarcón-Angeles, A. Merkoçi, and M. T. Ramírez-Silva, Supramolecular interaction of dopamine with β-cyclodextrin: An experimental and theoretical electrochemical study. Journal of Electroanalytical Chemistry, 2014. 717, p. 103-109.
- Mitra, R., O.B. Goodman, and T.T. Le, Enhanced detection of metastatic prostate cancer cells in human plasma with lipid bodies staining. BMC Cancer, 2014. 14: p. 91.
- Liu, S., Proteomic analyses of ethanol tolerance in Lactobacillus buchneri NRRL B-30929. Proteomics, 2014. 14(21-22): p. 2540-4.
- Le, T.T., Y. Urasaki, and G. Pizzorno, Uridine prevents tamoxifen-induced liver lipid droplet accumulation. BMC pharmacology & toxicology, 2014. 15: p. 27.
- Hawdon, J.M., Controlling soil-transmitted helminths: time to think inside the box? The Journal of parasitology, 2014. 100(2): p. 166-88.
- Dunphy, P.S., T. Luo, and J.W. McBride, Ehrlichia chaffeensis exploits host SUMOylation pathways to mediate effector-host interactions and promote intracellular survival. Infection and immunity, 2014. 82(10): p. 4154-68.
- Welham, N.V., Z. Chang, L.M. Smith, and B.L. Frey, Proteomic analysis of a decellularized human vocal fold mucosa scaffold using 2D electrophoresis and high-resolution mass spectrometry. Biomaterials, 2013. 34(3): p. 669-76.
- Sun, D., McGinn, M., Hankins, J. E., Mays, K. M., Rolfe, A., & Colello, R. J. (2013). Aging-and injury-related differential apoptotic response in the dentate gyrus of the hippocampus in rats following brain trauma. Frontiers in aging neuroscience, 5, 95.
- Schrodt, C., E.E. McHugh, M.A. Gawinowicz, H.L. Dupont, and E.L. Brown, Rifaximin-mediated changes to the epithelial cell proteome: 2-d gel analysis. PLoS ONE, 2013. 8(7): p. e68550.
- Peek, C.B., A.H. Affinati, K.M. Ramsey, H.Y. Kuo, W. Yu, L.A. Sena, O. Ilkayeva, B. Marcheva, Y. Kobayashi, C. Omura, D.C. Levine, D.J. Bacsik, D. Gius, C.B. Newgard, E. Goetzman, N.S. Chandel, J.M. Denu, M. Mrksich, and J. Bass, Circadian clock NAD+ cycle drives mitochondrial oxidative metabolism in mice. Science, 2013. 342(6158): p. 1243417.
- Martinez, M.A., K. Das, S. Saikolappan, L.A. Materon, and S. Dhandayuthapani, A serine/threonine phosphatase encoded by MG_207 of Mycoplasma genitalium is critical for its virulence. BMC microbiology, 2013. 13(1): p. 44.
- Loughran, P.A., D.B. Stolz, S.R. Barrick, D.S. Wheeler, P.A. Friedman, R.A. Rachubinski, S.C. Watkins, and T.R. Billiar, PEX7 and EBP50 target iNOS to the peroxisome in hepatocytes. Nitric oxide : biology and chemistry / official journal of the Nitric Oxide Society, 2013. 31: p. 9-19.
- Le, T.T., A. Ziemba, Y. Urasaki, E. Hayes, S. Brotman, and G. Pizzorno, Disruption of uridine homeostasis links liver pyrimidine metabolism to lipid accumulation. Journal of lipid research, 2013. 54(4): p. 1044-57.
- Koukuntla, R., W.J. Ramsey, W.B. Young, and C.J. Link, U6 promoter-enhanced GlnUAG suppressor tRNA has higher suppression efficacy and can be stably expressed in 293 cells. The journal of gene medicine, 2013. 15(2): p. 93-101.
- Kashyap, M.V., A.P. Ranjan, J. Shankardas, and J.K. Vishwanatha, Establishment of Human Retinal Microvascular Endothelial Cells with Extended Life-span. In Vivo, 2013. 27(6): p. 685-94.
- Han, B., V. Ujor, L.B. Lai, V. Gopalan, and T.C. Ezeji, Use of proteomic analysis to elucidate the role of calcium in acetone-butanol-ethanol fermentation by Clostridium beijerinckii NCIMB 8052. Applied and environmental microbiology, 2013. 79(1): p. 282-93.
- Hamilton, S.R., W.J. Cook, S. Gomathinayagam, I. Burnina, J. Bukowski, D. Hopkins, S. Schwartz, M. Du, N.J. Sharkey, P. Bobrowicz, S. Wildt, H. Li, T.A. Stadheim, and J.H. Nett, Production of sialylated O-linked glycans in Pichia pastoris. Glycobiology, 2013. 23(10): p. 1192-203.
- Wang, S., Z. Chen, V. Lam, J. Han, J. Hassler, B.N. Finck, N.O. Davidson, and R.J. Kaufman, IRE1alpha-XBP1s induces PDI expression to increase MTP activity for hepatic VLDL assembly and lipid homeostasis. Cell metabolism, 2012. 16(4): p. 473-86.
- Wang, J., D.K. Dube, J. White, Y. Fan, J.M. Sanger, and J.W. Sanger, Clock is not a component of Z-bands. Cytoskeleton, 2012. 69(12): p. 1021-31.
- Pal, A., D. Fontanilla, A. Gopalakrishnan, Y. K. Chae, J. L. Markley, and A.E. Ruoho, The sigma-1 receptor protects against cellular oxidative stress and activates antioxidant response elements. European journal of pharmacology, 2012. 682(1-3), p. 12-20.
- Nickolas, T.L., C.S. Forster, M.E. Sise, N. Barasch, D.S. Valle, M. Viltard, C. Buchen, S. Kupferman, M.L. Carnevali, M. Bennett, S. Mattei, A. Bovino, L. Argentiero, A. Magnano, P. Devarajan, K. Mori, H. Erdjument-Bromage, P. Tempst, L. Allegri, and J. Barasch, NGAL (Lcn2) monomer is associated with tubulointerstitial damage in chronic kidney disease. Kidney international, 2012. 82(6): p. 718-22.
- Mukherjee, A., G.H. Wheaton, P.H. Blum, and R.M. Kelly, Uranium extremophily is an adaptive, rather than intrinsic, feature for extremely thermoacidophilic Metallosphaera species. Proceedings of the National Academy of Sciences of the United States of America, 2012. 109(41): p. 16702-7.
- Mudrak, B. and R. Tamayo, The Vibrio cholerae Pst2 Phosphate Transport System Is Upregulated in Biofilms and Contributes to Biofilm-Induced Hyperinfectivity. Infection and immunity, 2012. 80(5): p. 1794-802.
- Merzendorfer, H., H.S. Kim, S.S. Chaudhari, M. Kumari, C.A. Specht, S. Butcher, S.J. Brown, J.R. Manak, R.W. Beeman, K.J. Kramer, and S. Muthukrishnan, Genomic and proteomic studies on the effects of the insect growth regulator diflubenzuron in the model beetle species Tribolium castaneum. Insect biochemistry and molecular biology, 2012. 42(4): p. 264-76.
- McGinn, M.J., R.J. Colello, and D. Sun, Age-related proteomic changes in the subventricular zone and their association with neural stem/progenitor cell proliferation. Journal of neuroscience research, 2012. 90(6): p. 1159-68.
- Marancik, D.P., J.H. Leary, M.M. Fast, M.F. Flajnik, and A.C. Camus, Humoral response of captive zebra sharks Stegostoma fasciatum to salivary gland proteins of the leech Branchellion torpedinis. Fish & shellfish immunology, 2012. 33(4): p. 1000-7.
- Mann, B., T. van Opijnen, J. Wang, C. Obert, Y.D. Wang, R. Carter, D.J. McGoldrick, G. Ridout, A. Camilli, E.I. Tuomanen, and J.W. Rosch, Control of virulence by small RNAs in Streptococcus pneumoniae. PLoS pathogens, 2012. 8(7): p. e1002788.
- Kannan, K., N. Vazquez-Laslop, and A.S. Mankin, Selective protein synthesis by ribosomes with a drug-obstructed exit tunnel. Cell, 2012. 151(3): p. 508-20.
- Hilton, J.D., A.K. Brady, S.A. Spaho, and P.D. Vize, Photoreception and signal transduction in corals: proteomic and behavioral evidence for cytoplasmic calcium as a mediator of light responsivity. The Biological bulletin, 2012. 223(3): p. 291-9.
- Fan, J., L. Dong, S. Mishra, Y. Chen, P. FitzGerald, and G. Wistow, A role for gammaS-crystallin in the organization of actin and fiber cell maturation in the mouse lens. The FEBS journal, 2012. 279(16): p. 2892-904.
- Dittmer, N.T., Y. Hiromasa, J.M. Tomich, N. Lu, R.W. Beeman, K.J. Kramer, and M.R. Kanost, Proteomic and transcriptomic analyses of rigid and membranous cuticles and epidermis from the elytra and hindwings of the red flour beetle, Tribolium castaneum. Journal of proteome research, 2012. 11(1): p. 269-78.
- Colín-Orozco, E., M. T. Ramírez-Silva, S. Corona-Avendano, M. Romero-Romo, and M. Palomar-Pardavé, Electrochemical quantification of dopamine in the presence of ascorbic acid and uric acid using a simple carbon paste electrode modified with SDS micelles at pH 7. Electrochimica acta, 2012. 85, p. 307-313
- Christen, J.M., Y. Hiromasa, C. An, and M.R. Kanost, Identification of plasma proteinase complexes with serpin-3 in Manduca sexta. Insect biochemistry and molecular biology, 2012. 42(12): p. 946-55.
- Chan, K., S. Casjens, and N. Parveen, Detection of Established Virulence Genes and Plasmids To Differentiate Borrelia burgdorferi Strains. Infection and immunity, 2012. 80(4): p. 1519-29.
- Chan, K., M. Awan, S.W. Barthold, and N. Parveen, Comparative molecular analyses of Borrelia burgdorferi sensu stricto strains B31 and N40D10/E9 and determination of their pathogenicity. BMC microbiology, 2012. 12: p. 157.
- Welham, N.V., M. Yamashita, S.H. Choi, and C. Ling, Cross-sample validation provides enhanced proteome coverage in rat vocal fold mucosa. PLoS ONE, 2011. 6(3): p. e17754.
- Wang, J., X. Han, S. Saha, T. Xu, R. Rai, F. Zhang, Y.I. Wolf, A. Wolfson, J.R. Yates, 3rd, and A. Kashina, Arginyltransferase is an ATP-independent self-regulating enzyme that forms distinct functional complexes in vivo. Chemistry & biology, 2011. 18(1): p. 121-30.
- Shippy, D.C., N.M. Eakley, P.N. Bochsler, and A.A. Fadl, Biological and virulence characteristics of Salmonella enterica serovar Typhimurium following deletion of glucose-inhibited division (gidA) gene. Microbial pathogenesis, 2011. 50(6): p. 303-13.
- Ruvolo, P.P., L. Zhou, J.C. Watt, V.R. Ruvolo, J.K. Burks, T. Jiffar, S. Kornblau, M. Konopleva, and M. Andreeff, Targeting PKC-mediated signal transduction pathways using enzastaurin to promote apoptosis in acute myeloid leukemia-derived cell lines and blast cells. Journal of cellular biochemistry, 2011. 112(6): p. 1696-707.
- Noga, E. J., K.L. Stone, A. Wood, W.L. Gordon, and D. Robinette, Primary structure and cellular localization of callinectin, an antimicrobial peptide from the blue crab. Developmental & Comparative Immunology, 2011. 35(4), p. 409-415.
- Jiang, Y., F. Li, D. Zha, T.I. Potgieter, T. Mitchell, R. Moore, M. Cukan, N.R. Houston-Cummings, A. Nylen, J.E. Drummond, T.W. McKelvey, M. d’Anjou, T.A. Stadheim, N. Sethuraman, and H. Li, Purification process development of a recombinant monoclonal antibody expressed in glycoengineered Pichia pastoris. Protein expression and purification, 2011. 76(1): p. 7-14.
- Eakley, N.M., P.N. Bochsler, P. Gopal Reddy, A.K. Chopra, and A.A. Fadl, Biological and virulence characteristics of the YqhC mutant of Salmonella. Microbiology and immunology, 2011. 55(12): p. 830-40.
- Boller, A. J., P. J. Thomas, C. M. Cavanaugh, and K. M. Scott, Low stable carbon isotope fractionation by coccolithophore RubisCO. Geochimica et cosmochimica acta, 2011. 75(22), p. 7200-7207.
- Benoit, S.L. and R.J. Maier, Mua (HP0868) Is a Nickel-Binding Protein That Modulates Urease Activity in Helicobacter pylori. mBio, 2011. 2(2).
- Alonzo, F., 3rd, B. Xayarath, J.C. Whisstock, and N.E. Freitag, Functional analysis of the Listeria monocytogenes secretion chaperone PrsA2 and its multiple contributions to bacterial virulence. Molecular microbiology, 2011. 80(6): p. 1530-48.
- Abomoelak, B., S.A. Marcus, S.K. Ward, P.C. Karakousis, H. Steinberg, and A.M. Talaat, Characterization of a Novel Heat Shock Protein (Hsp22.5) Involved in the Pathogenesis of Mycobacterium tuberculosis. Journal of bacteriology, 2011. 193(14): p. 3497-505.
- Simeonova, D. D., M. M. Wilson, W. W. Metcalf, and B. Schink, Identification and heterologous expression of genes involved in anaerobic dissimilatory phosphite oxidation by Desulfotignum phosphitoxidans. Journal of bacteriology, 2010. 192(19), p. 5237-5244.
- Shepard, B.D., D.J. Tuma, and P.L. Tuma, Chronic ethanol consumption induces global hepatic protein hyperacetylation. Alcohol Clin Exp Res, 2010. 34(2): p. 280-91.
- Saha, S., M.M. Mundia, F. Zhang, R.W. Demers, F. Korobova, T. Svitkina, A.A. Perieteanu, J.F. Dawson, and A. Kashina, Arginylation regulates intracellular actin polymer level by modulating actin properties and binding of capping and severing proteins. Mol Biol Cell, 2010. 21(8): p. 1350-61.
- Murphy, D., J. Parker, M. Zhou, F.M. Fadlelmola, C. Steidl, A. Karsan, R.D. Gascoyne, H. Chen, and D. Banerjee, Constitutively overexpressed 21 kDa protein in Hodgkin lymphoma and aggressive non-Hodgkin lymphomas identified as cytochrome B5b (CYB5B). Mol Cancer, 2010. 9: p. 14.
- Martinez, A.R., J. Abranches, J.K. Kajfasz, and J.A. Lemos, Characterization of the Streptococcus sobrinus acid-stress response by interspecies microarrays and proteomics. Molecular oral microbiology, 2010. 25(5): p. 331-42.
- Ko, A.C., J. Hernandez, J.P. Brinton, E.A. Faidley, S.A. Mugge, M.B. Mets, R.H. Kardon, J.C. Folk, R.F. Mullins, and E.M. Stone, Anti-gamma-enolase autoimmune retinopathy manifesting in early childhood. Arch Ophthalmol, 2010. 128(12): p. 1590-5.
- Hwang, C.S., A. Shemorry, and A. Varshavsky, N-terminal acetylation of cellular proteins creates specific degradation signals. Science, 2010. 327(5968): p. 973-7.
- Gupta, S., J. Hudak, E. Killeen, J. E. Larson, and J. C. Cohen, Transient in utero nicotine exposure stimulates mechanosensory-dependent lung development. Experimental Lung Research, 2010. 36(8), p. 491-498.
- Esposito, A.M. and T.G. Kinzy, The eukaryotic translation elongation Factor 1Bgamma has a non-guanine nucleotide exchange factor role in protein metabolism. The Journal of biological chemistry, 2010. 285(49): p. 37995-8004.
- Darville, L.N., M.E. Merchant, A. Hasan, and K.K. Murray, Proteome analysis of the leukocytes from the American alligator (Alligator mississippiensis) using mass spectrometry. Comparative biochemistry and physiology. Part D, Genomics & proteomics, 2010. 5(4): p. 308-16.
- Cong, Y., M.L. Baker, J. Jakana, D. Woolford, E.J. Miller, S. Reissmann, R.N. Kumar, A.M. Redding-Johanson, T.S. Batth, A. Mukhopadhyay, S.J. Ludtke, J. Frydman, and W. Chiu, 4.0-A resolution cryo-EM structure of the mammalian chaperonin TRiC/CCT reveals its unique subunit arrangement. Proc Natl Acad Sci U S A, 2010. 107: p. 4967-72.
- Chattoraj, P., A. Banerjee, S. Biswas, and I. Biswas, ClpP of Streptococcus mutans Differentially Regulates Expression of Genomic Islands, Mutacin Production, and Antibiotic Tolerance. J Bacteriol, 2010. 192(5): p. 1312-23.
- Bennion, D., E.S. Charlson, E. Coon, and R. Misra, Dissection of beta-barrel outer membrane protein assembly pathways through characterizing BamA POTRA 1 mutants of Escherichia coli. Mol Microbiol, 2010. 77(5): p. 1153-71.
- Arakane, Y., N.T. Dittmer, Y. Tomoyasu, K.J. Kramer, S. Muthukrishnan, R.W. Beeman, and M.R. Kanost, Identification, mRNA expression and functional analysis of several yellow family genes in Tribolium castaneum. Insect Biochem Mol Biol, 2010. 40(3): p. 259-66.
- Alonzo, F., 3rd and N.E. Freitag, Listeria monocytogenes PrsA2 is required for virulence factor secretion and bacterial viability within the host cell cytosol. Infect Immun, 2010. 78(11): p. 4944-57.
- Zhou, Q., D.D. Price, R.M. Caudle, and G.N. Verne, Spinal NMDA NR1 subunit expression following transient TNBS colitis. Brain Res, 2009. 1279: p. 109-20.
- Wade, S.L., K. Poorey, S. Bekiranov, and D.T. Auble, The Snf1 kinase and proteasome-associated Rad23 regulate UV-responsive gene expression. The EMBO journal, 2009. 28(19): p. 2919-31.
- Smith, T. J., S.J. Montain, D. Anderson, and A. J. Young, Plasma amino acid responses after consumption of beverages with varying protein type. International journal of sport nutrition and exercise metabolism, 2009. 19(1), p. 1-17.
- Robak, L.A., K. Venkatesh, H. Lee, S.J. Raiker, Y. Duan, J. Lee-Osbourne, T. Hofer, R.G. Mage, C. Rader, and R.J. Giger, Molecular basis of the interactions of the Nogo-66 receptor and its homolog NgR2 with myelin-associated glycoprotein: development of NgROMNI-Fc, a novel antagonist of CNS myelin inhibition. J Neurosci, 2009. 29(18): p. 5768-83.
- Pollack, K., K. Balazs, and O. Ogunseitan, Proteomic assessment of caffeine effects on coral symbionts. Environ Sci Technol, 2009. 43(6): p. 2085-91.
- Nossa, C.W., P. Jain, B. Tamilselvam, V.R. Gupta, L.F. Chen, V. Schreiber, S. Desnoyers, and S.R. Blanke, Activation of the abundant nuclear factor poly(ADP-ribose) polymerase-1 by Helicobacter pylori. Proc Natl Acad Sci U S A, 2009. 106(47): p. 19998-20003.
- Mitsuzawa, S., H. Kagawa, Y. Li, S.L. Chan, C.D. Paavola, and J.D. Trent, The rosettazyme: a synthetic cellulosome. J Biotechnol, 2009. 143(2): p. 139-44.
- Liu, X., T. Ramjiganesh, Y.H. Chen, S.W. Chung, S.R. Hall, S.L. Schissel, R.F. Padera, Jr., R. Liao, K.G. Ackerman, J. Kajstura, A. Leri, P. Anversa, S.F. Yet, M.D. Layne, and M.A. Perrella, Disruption of striated preferentially expressed gene locus leads to dilated cardiomyopathy in mice. Circulation, 2009. 119(2): p. 261-8.
- Kisiela, D.I. and C.J. Czuprynski, Identification of Mannheimia haemolytica adhesins involved in binding to bovine bronchial epithelial cells. Infect Immun, 2009. 77(1): p. 446-55.
- Kiselev, A.O., M.C. Skinner, and M.F. Lampe, Analysis of pmpD expression and PmpD post-translational processing during the life cycle of Chlamydia trachomatis serovars A, D, and L2. PLoS One, 2009. 4(4): p. e5191.
- Kang, E.Y., M. Ponzio, P.P. Gupta, F. Liu, A. Butensky, and D.E. Gutstein, Identification of Binding Partners for the Cytoplasmic Loop of Connexin43: A Novel Interaction with beta-Tubulin. Cell Commun Adhes, 2009: p. 1-10.
- Endoh, T. and J.N. Engel, CbpA: a polarly localized novel cyclic AMP-binding protein in Pseudomonas aeruginosa. J Bacteriol, 2009. 191(23): p. 7193-205.
- Collado, M.S., O. Khabour, D. Fioravante, J.H. Byrne, and A. Eskin, Post-translational regulation of an Aplysia glutamate transporter during long-term facilitation. J Neurochem, 2009. 108(1): p. 176-89.
- Welham, N.V., G. Marriott, I. Tateya, and D.M. Bless, Proteomic changes in rat thyroarytenoid muscle induced by botulinum neurotoxin injection. Proteomics, 2008. 8(9): p. 1933-44.
- Trachtenberg, S., L. M. Dorward, V. V. Speransky, H. Jaffe, S. B. Andrews, and R. D. Leapman, Structure of the cytoskeleton of Spiroplasma melliferum BC3 and its interactions with the cell membrane. Journal of molecular biology, 2008. 378(4), p. 778-789.
- Thompson, J., N. Jakubovics, B. Abraham, S. Hess, and A. Pikis, The sim operon facilitates the transport and metabolism of sucrose isomers in Lactobacillus casei ATCC 334. J Bacteriol, 2008. 190(9): p. 3362-73.
- Sampath, T. K., Simic, P., Moreno, S., Bukanov, N., Draca, N., Kufner, V., … & Vukicevic, S. (2008). Sevelamer restores bone volume and improves bone microarchitecture and strength in aged ovariectomized rats. Endocrinology, 149(12), 6092-6102.
- Rai, R., C.C. Wong, T. Xu, N.A. Leu, D.W. Dong, C. Guo, K.J. McLaughlin, J.R. Yates, 3rd, and A. Kashina, Arginyltransferase regulates alpha cardiac actin function, myofibril formation and contractility during heart development. Development, 2008. 135(23): p. 3881-9.
- Montero, E., M. Rodriguez, L. M. Gonzalez, and C. A. Lobo, Babesia divergens: identification and characterization of BdHSP-20, a small heat shock protein. Experimental parasitology, 2008. 119(2), p. 238-245.
- Mhyre, T.R., R. Loy, P.N. Tariot, L.A. Profenno, K.A. Maguire-Zeiss, D. Zhang, P.D. Coleman, and H.J. Federoff, Proteomic analysis of peripheral leukocytes in Alzheimer’s disease patients treated with divalproex sodium. Neurobiol Aging, 2008. 29(11): p. 1631-43.
- McGinn, M. J., Sun, D., & Colello, R. J. (2008). Utilizing X-irradiation to selectively eliminate neural stem/progenitor cells from neurogenic regions of the mammalian brain. Journal of neuroscience methods, 170(1), 9-15.
- MacKichan, J.K., H.L. Gerns, Y.T. Chen, P. Zhang, and J.E. Koehler, A SacB mutagenesis strategy reveals that the Bartonella quintana variably expressed outer membrane proteins are required for bloodstream infection of the host. Infect Immun, 2008. 76(2): p. 788-95.
- Lunn, C.A., E.P. Reich, J.S. Fine, B. Lavey, J.A. Kozlowski, R.W. Hipkin, D.J. Lundell, and L. Bober, Biology and therapeutic potential of cannabinoid CB2 receptor inverse agonists. Br J Pharmacol, 2008. 153(2): p. 226-39.
- Klaiman, G., T.L. Petzke, J. Hammond, and A.C. Leblanc, Targets of caspase-6 activity in human neurons and Alzheimer disease. Mol Cell Proteomics, 2008. 7(8): p. 1541-55.
- Keller, L. C., & Marshall, W. F. (2008). Isolation and proteomic analysis of Chlamydomonas centrioles. In Organelle Proteomics (pp. 289-300). Humana Press.
- Hinman, J.D., C.D. Chen, S.Y. Oh, W. Hollander, and C.R. Abraham, Age-dependent accumulation of ubiquitinated 2′,3′-cyclic nucleotide 3′-phosphodiesterase in myelin lipid rafts. Glia, 2008. 56(1): p. 118-33.
- Han, E.K., T. McGonigal, C. Butler, V.L. Giranda, and Y. Luo, Characterization of Akt overexpression in MiaPaCa-2 cells: prohibitin is an Akt substrate both in vitro and in cells. Anticancer Res, 2008. 28(2A): p. 957-63.
- Funk, W.E., S. Waidyanatha, S.H. Chaing, and S.M. Rappaport, Hemoglobin adducts of benzene oxide in neonatal and adult dried blood spots. Cancer Epidemiol Biomarkers Prev, 2008. 17(8): p. 1896-901.
- Alarcón-Angeles, G., S. Corona-Avendaño, M. Palomar-Pardavé, A. Rojas-Hernández, M. Romero-Romo, and M. D. Ramirez-Silva, Selective electrochemical determination of dopamine in the presence of ascorbic acid using sodium dodecyl sulfate micelles as masking agent. Electrochimica Acta, 2008. 53(6), p. 3013-3020.
- Wong, C.C., T. Xu, R. Rai, A.O. Bailey, J.R. Yates, 3rd, Y.I. Wolf, H. Zebroski, and A. Kashina, Global analysis of posttranslational protein arginylation. PLoS Biol, 2007. 5(10): p. e258.
- Welch, E.M., E.R. Barton, J. Zhuo, Y. Tomizawa, W.J. Friesen, P. Trifillis, S. Paushkin, M. Patel, C.R. Trotta, S. Hwang, R.G. Wilde, G. Karp, J. Takasugi, G. Chen, S. Jones, H. Ren, Y.C. Moon, D. Corson, A.A. Turpoff, J.A. Campbell, M.M. Conn, A. Khan, N.G. Almstead, J. Hedrick, A. Mollin, N. Risher, M. Weetall, S. Yeh, A.A. Branstrom, J.M. Colacino, J. Babiak, W.D. Ju, S. Hirawat, V.J. Northcutt, L.L. Miller, P. Spatrick, F. He, M. Kawana, H. Feng, A. Jacobson, S.W. Peltz, and H.L. Sweeney, PTC124 targets genetic disorders caused by nonsense mutations. Nature, 2007. 447(7140): p. 87-91.
- Small, E.J., N. Sacks, J. Nemunaitis, W.J. Urba, E. Dula, A.S. Centeno, W.G. Nelson, D. Ando, C. Howard, F. Borellini, M. Nguyen, K. Hege, and J.W. Simons, Granulocyte macrophage colony-stimulating factor–secreting allogeneic cellular immunotherapy for hormone-refractory prostate cancer. Clin Cancer Res, 2007. 13(13): p. 3883-91.
- Schilder, R.J. and J.H. Marden, Parasites, proteomics and performance: effects of gregarine gut parasites on dragonfly flight muscle composition and function. J Exp Biol, 2007. 210(Pt 24): p. 4298-306.
- Rother, M., E. Oelgeschlager, and W.M. Metcalf, Genetic and proteomic analyses of CO utilization by Methanosarcina acetivorans. Archives of microbiology, 2007. 188(5): p. 463-72.
- Port, G.C. and N.E. Freitag, Identification of Novel Listeria monocytogenes Secreted Virulence Factors following Mutational Activation of the Central Virulence Regulator, PrfA. Infect Immun, 2007. 75(12): p. 5886-97.
- Lemos, J.A., Y. Luzardo, and R.A. Burne, Physiologic effects of forced down-regulation of dnaK and groEL expression in Streptococcus mutans. Journal of bacteriology, 2007. 189(5): p. 1582-8.
- Kim, S. and K. Shah, Dissecting yeast Hog1 MAP kinase pathway using a chemical genetic approach. FEBS Lett, 2007. 581(6): p. 1209-16.
- Hale, L., Annexin A2 heterotetramer: role in tight junction. J Mol Endocrinol, 2007. 38(4), p. 441-454.
- Eremeeva, M.E., H.L. Gerns, S.L. Lydy, J.S. Goo, E.T. Ryan, S.S. Mathew, M.J. Ferraro, J.M. Holden, W.L. Nicholson, G.A. Dasch, and J.E. Koehler, Bacteremia, fever, and splenomegaly caused by a newly recognized bartonella species. N Engl J Med, 2007. 356(23): p. 2381-7.
- Den Haan, R., J. E. Mcbride, D. C. La Grange, L. R. Lynd, and W. H. Van Zyl, Functional expression of cellobiohydrolases in Saccharomyces cerevisiae towards one-step conversion of cellulose to ethanol. Enzyme and Microbial Technology, 2007. 40(5), p. 1291-1299.
- Conant, C.G. and R.S. Stephens, Chlamydia attachment to mammalian cells requires protein disulfide isomerase. Cell Microbiol, 2007. 9(1): p. 222-32.
- Chae, K.S., G.Y. Ko, and S.E. Dryer, Tyrosine phosphorylation of cGMP-gated ion channels is under circadian control in chick retina photoreceptors. Invest Ophthalmol Vis Sci, 2007. 48(2): p. 901-6.
- Cenedella, R. J., P. S. Sexton, L. Brako, W. K. Lo, and R. F. Jacob, Status of caveolin-1 in various membrane domains of the bovine lens. Experimental eye research, 2007. 85(4), p. 473-481.
- Campbell, E.J. and C.A. Owen, The sulfate groups of chondroitin sulfate- and heparan sulfate-containing proteoglycans in neutrophil plasma membranes are novel binding sites for human leukocyte elastase and cathepsin G. J Biol Chem, 2007. 282(19): p. 14645-54.
- Boonjakuakul, J.K., H.L. Gerns, Y.T. Chen, L.D. Hicks, M.F. Minnick, S.E. Dixon, S.C. Hall, and J.E. Koehler, Proteomic and immunoblot analyses of Bartonella quintana total membrane proteins identify antigens recognized by sera from infected patients. Infect Immun, 2007. 75(5): p. 2548-61.
- Avendano, S. C., G. A. Angeles, G. R. Pina, M. R. Romo, M. Palomar-Pardavé, A. R. Hernández, and M. T. Ramírez-Silva, Effect Of Sodium Dodecyl Sulphate On The Analytical Determination Of Dopamine In Presence Of Ascorbic Acid. ECS Transactions, 2007. 3(20), p. 23.
- Alexander, J.S., A. Minagar, M. Harper, S. Robinson-Jackson, M. Jennings, and S.J. Smith, Proteomic analysis of human cerebral endothelial cells activated by multiple sclerosis serum and IFNbeta-1b. Journal of molecular neuroscience : MN, 2007. 32(3): p. 169-78.
- Zhou, Q., R.M. Caudle, D.D. Price, A.Y. Del Valle-Pinero, and G.N. Verne, Selective up-regulation of NMDA-NR1 receptor expression in myenteric plexus after TNBS induced colitis in rats. Mol Pain, 2006. 2: p. 3.
- Zhou, Q., R.M. Caudle, B. Moshiree, D.D. Price, and G.N. Verne, Phosphorylation of NMDA NR1 subunits in the myenteric plexus during TNBS induced colitis. Neuroscience letters, 2006. 406(3): p. 250-5.
- Xicohtencatl-Cortes, J., S. Lyons, A.P. Chaparro, D.R. Hernandez, Z. Saldana, M.A. Ledesma, M.A. Rendon, A.T. Gewirtz, K.E. Klose, and J.A. Giron, Identification of Proinflammatory Flagellin Proteins in Supernatants of Vibrio cholerae O1 by Proteomics Analysis. Mol Cell Proteomics, 2006. 5(12): p. 2374-83.
- Wen, Z.T., H.V. Baker, and R.A. Burne, Influence of BrpA on critical virulence attributes of Streptococcus mutans. J Bacteriol, 2006. 188(8): p. 2983-92.
- Welham, N.V., G. Marriott, and D.M. Bless, Proteomic profiling of rat thyroarytenoid muscle. J Speech Lang Hear Res, 2006. 49(3): p. 671-85.
- Vijayasarathy, C., M.A. Gawinowicz, Y. Zeng, Y. Takada, R.A. Bush, and P.A. Sieving, Identification and characterization of two mature isoforms of retinoschisin in murine retina. Biochem Biophys Res Commun, 2006. 349(1): p. 99-105.
- Upreti, M., C.S. Lyle, B. Skaug, L. Du, and T.C. Chambers, Vinblastine-induced apoptosis is mediated by discrete alterations in subcellular location, oligomeric structure, and activation status of specific Bcl-2 family members. J Biol Chem, 2006. 281(23): p. 15941-50.
- Suckow, A.T., I.R. Sweet, B. Van Yserloo, E.A. Rutledge, T.R. Hall, M. Waldrop, and S.D. Chessler, Identification and characterization of a novel isoform of the vesicular gamma-aminobutyric acid transporter with glucose-regulated expression in rat islets. J Mol Endocrinol, 2006. 36(1): p. 187-99.
- Reiter, L.T., T.N. Seagroves, M. Bowers, and E. Bier, Expression of the Rho-GEF Pbl/ECT2 is regulated by the UBE3A E3 ubiquitin ligase. Hum Mol Genet, 2006. 15(18): p. 2825-35.
- Pukatzki, S., A.T. Ma, D. Sturtevant, B. Krastins, D. Sarracino, W.C. Nelson, J.F. Heidelberg, and J.J. Mekalanos, Identification of a conserved bacterial protein secretion system in Vibrio cholerae using the Dictyostelium host model system. Proc Natl Acad Sci U S A, 2006. 103(5): p. 1528-33.
- Pearce, M.J., P. Arora, R.A. Festa, S.M. Butler-Wu, R.S. Gokhale, and K.H. Darwin, Identification of substrates of the Mycobacterium tuberculosis proteasome. The EMBO journal, 2006. 25(22): p. 5423-32.
- Nakamura, E., P. Abreu-e-Lima, Y. Awakura, T. Inoue, T. Kamoto, O. Ogawa, H. Kotani, T. Manabe, G.J. Zhang, K. Kondo, V. Nose, and W.G. Kaelin, Jr., Clusterin is a secreted marker for a hypoxia-inducible factor-independent function of the von Hippel-Lindau tumor suppressor protein. Am J Pathol, 2006. 168(2): p. 574-84.
- Karakozova, M., M. Kozak, C.C. Wong, A.O. Bailey, J.R. Yates, 3rd, A. Mogilner, H. Zebroski, and A. Kashina, Arginylation of beta-actin regulates actin cytoskeleton and cell motility. Science, 2006. 313(5784): p. 192-6.
- Janech, M.G., A. Krell, T. Mock, J. Kang, and J.A. Raymond, Ice-binding proteins from sea ice diatoms (bacillariophyceae). Journal of Phycology, 2006. 42(2): p. 410-416.
- Hu, R.G., C.S. Brower, H. Wang, I.V. Davydov, J. Sheng, J. Zhou, Y.T. Kwon, and A. Varshavsky, Arginyltransferase, its specificity, putative substrates, bidirectional promoter, and splicing-derived isoforms. J Biol Chem, 2006. 281(43): p. 32559-73.
- Hanft, L.M., I.N. Rybakova, J.R. Patel, J.A. Rafael-Fortney, and J.M. Ervasti, Cytoplasmic gamma-actin contributes to a compensatory remodeling response in dystrophin-deficient muscle. Proc Natl Acad Sci U S A, 2006. 103(14): p. 5385-90.
- Garchow, B.G., S.P. Jog, B.D. Mehta, J.M. Monosso, and P.P. Murthy, Alkaline phytase from Lilium longiflorum: purification and structural characterization. Protein expression and purification, 2006. 46(2): p. 221-32.
- Fritzinger, A.E., D.M. Toney, R.C. MacLean, and F. Marciano-Cabral, Identification of a Naegleria fowleri membrane protein reactive with anti-human CD59 antibody. Infect Immun, 2006. 74(2): p. 1189-95.
- Fong, J.C., K. Karplus, G.K. Schoolnik, and F.H. Yildiz, Identification and characterization of RbmA, a novel protein required for the development of rugose colony morphology and biofilm structure in Vibrio cholerae. J Bacteriol, 2006. 188(3): p. 1049-59.
- Dall’Agnol, M., C. Bernstein, H. Bernstein, H. Garewal, and C.M. Payne, Identification of S-nitrosylated proteins after chronic exposure of colon epithelial cells to deoxycholate. Proteomics, 2006. 6(5): p. 1654-62.
- Cohen, J.C. and J.E. Larson, Cystic fibrosis transmembrane conductance regulator (CFTR) dependent cytoskeletal tension during lung organogenesis. Developmental dynamics : an official publication of the American Association of Anatomists, 2006. 235(10): p. 2736-48.
- Clarke, S.L., A. Vasanthakumar, S.A. Anderson, C. Pondarre, C.M. Koh, K.M. Deck, J.S. Pitula, C.J. Epstein, M.D. Fleming, and R.S. Eisenstein, Iron-responsive degradation of iron-regulatory protein 1 does not require the Fe-S cluster. Embo J, 2006. 25(3): p. 544-53.
- Cho, D., N. Sung, and M.T. Collins, Identification of proteins of potential diagnostic value for bovine paratuberculosis. Proteomics, 2006. 6(21): p. 5785-94.
- Cenedella, R.J., A.R. Neely, and P. Sexton, Multiple forms of 22 kDa caveolin-1 alpha present in bovine lens cells could reflect variable palmitoylation. Exp Eye Res, 2006. 82(2): p. 229-35.
- Behnam, K., S.S. Murray, and E.J. Brochmann, BMP stimulation of alkaline phosphatase activity in pluripotent mouse C2C12 cells is inhibited by dermatopontin, one of the most abundant low molecular weight proteins in demineralized bone matrix. Connect Tissue Res, 2006. 47(5): p. 271-7.
- Ackerley, D.F., Y. Barak, S.V. Lynch, J. Curtin, and A. Matin, Effect of chromate stress on Escherichia coli K-12. J Bacteriol, 2006. 188(9): p. 3371-81.
- Abranches, J., M.M. Candella, Z.T. Wen, H.V. Baker, and R.A. Burne, Different roles of EIIABMan and EIIGlc in regulation of energy metabolism, biofilm development, and competence in Streptococcus mutans. J Bacteriol, 2006. 188(11): p. 3748-56.
- Xu, H., X. Wang, D. Zimmerman, E.S. Boja, J. Wang, E.J. Bilsky, and R.B. Rothman, Chronic morphine up-regulates G alpha12 and cytoskeletal proteins in Chinese hamster ovary cells expressing the cloned mu opioid receptor. J Pharmacol Exp Ther, 2005. 315(1): p. 248-55.
- Wen, Z.T., P. Suntharaligham, D.G. Cvitkovitch, and R.A. Burne, Trigger factor in Streptococcus mutans is involved in stress tolerance, competence development, and biofilm formation. Infect Immun, 2005. 73(1): p. 219-25.
- Welte, M.A., S. Cermelli, J. Griner, A. Viera, Y. Guo, D.H. Kim, J.G. Gindhart, and S.P. Gross, Regulation of lipid-droplet transport by the perilipin homolog LSD2. Curr Biol, 2005. 15(14): p. 1266-75.
- Shah, K. and F. Vincent, Divergent roles of c-Src in controlling platelet-derived growth factor-dependent signaling in fibroblasts. Mol Biol Cell, 2005. 16(11): p. 5418-32.
- Schmid, A.K., H.A. Howell, J.R. Battista, S.N. Peterson, and M.E. Lidstrom, Global transcriptional and proteomic analysis of the Sig1 heat shock regulon of Deinococcus radiodurans. J Bacteriol, 2005. 187(10): p. 3339-51.
- Rother, M., P. Boccazzi, A. Bose, M.A. Pritchett, and W.W. Metcalf, Methanol-dependent gene expression demonstrates that methyl-coenzyme M reductase is essential in Methanosarcina acetivorans C2A and allows isolation of mutants with defects in regulation of the methanol utilization pathway. J Bacteriol, 2005. 187(16): p. 5552-9.
- Paskewitz, S.M. and L. Shi, The hemolymph proteome of Anopheles gambiae. Insect Biochem Mol Biol, 2005. 35(8): p. 815-24.
- Ou, H., Y.H. Shen, B. Utama, J. Wang, X. Wang, J. Coselli, and X.L. Wang, Effect of nuclear actin on endothelial nitric oxide synthase expression. Arterioscler Thromb Vasc Biol, 2005. 25(12): p. 2509-14.
- Matsumoto, N., O.D. Jo, R.N. Shih, E.J. Brochmann, S.S. Murray, V. Hong, J. Yanagawa, and N. Yanagawa, Increased cathepsin D release by Hyp mouse osteoblast cells. Am J Physiol Endocrinol Metab, 2005. 289(1): p. E123-32.
- Kuznetsov, Y.G., M. Zhang, T.M. Menees, A. McPherson, and S. Sandmeyer, Investigation by atomic force microscopy of the structure of Ty3 retrotransposon particles. J Virol, 2005. 79(13): p. 8032-45.
- Kerepesi, L.A., P.B. Keiser, T.J. Nolan, G.A. Schad, D. Abraham, and T.B. Nutman, DNA immunization with Na+-K+ ATPase (Sseat-6) induces protective immunity to larval Strongyloides stercoralis in mice. Infect Immun, 2005. 73(4): p. 2298-305.
- Holtz, W.A., J.M. Turetzky, and K.L. O’Malley, Microarray expression profiling identifies early signaling transcripts associated with 6-OHDA-induced dopaminergic cell death. Antioxid Redox Signal, 2005. 7(5-6): p. 639-48.
- Grzesiak, J.J., K.C. Smith, C. Chalberg, C. Truong, D.W. Burton, L.J. Deftos, and M. Bouvet, Heat shock protein-70 expressed on the surface of cancer cells binds parathyroid hormone-related protein in vitro. Endocrinology, 2005. 146(8): p. 3567-76.
- Ellis, C.E., E.J. Murphy, D.C. Mitchell, M.Y. Golovko, F. Scaglia, G.C. Barcelo-Coblijn, and R.L. Nussbaum, Mitochondrial lipid abnormality and electron transport chain impairment in mice lacking alpha-synuclein. Mol Cell Biol, 2005. 25(22): p. 10190-201.
- Cohen, R., M.R. Suzuki, and K.E. Hammel, Processive endoglucanase active in crystalline cellulose hydrolysis by the brown rot basidiomycete Gloeophyllum trabeum. Appl Environ Microbiol, 2005. 71(5): p. 2412-7.
- Behnam, K., S.S. Murray, and E.J. Brochmann, Identification and characterization of valosin-containing protein (VCP/p97) in untransformed osteoblast-like cells. J Orthop Res, 2005. 23(3): p. 618-24.
- Basheer, R., R. Brown, V. Ramesh, S. Begum, and R.W. McCarley, Sleep deprivation-induced protein changes in basal forebrain: implications for synaptic plasticity. J Neurosci Res, 2005. 82(5): p. 650-8.
- Archuleta, R.J., P. Yvonne Hoppes, and T.P. Primm, Mycobacterium avium enters a state of metabolic dormancy in response to starvation. Tuberculosis (Edinb), 2005. 85(3): p. 147-58.
- Zhang, Z., G. Izaguirre, S.Y. Lin, H.Y. Lee, E. Schaefer, and B. Haimovich, The phosphorylation of vinculin on tyrosine residues 100 and 1065, mediated by SRC kinases, affects cell spreading. Mol Biol Cell, 2004. 15(9): p. 4234-47.
- Zhang, P., B.B. Chomel, M.K. Schau, J.S. Goo, S. Droz, K.L. Kelminson, S.S. George, N.W. Lerche, and J.E. Koehler, A family of variably expressed outer-membrane proteins (Vomp) mediates adhesion and autoaggregation in Bartonella quintana. Proc Natl Acad Sci U S A, 2004. 101(37): p. 13630-5.
- Wu, K., M.E. Bottazzi, C. de la Fuente, L. Deng, S.D. Gitlin, A. Maddukuri, S. Dadgar, H. Li, A. Vertes, A. Pumfery, and F. Kashanchi, Protein profile of tax-associated complexes. J Biol Chem, 2004. 279(1): p. 495-508.
- Wen, Z.T. and R.A. Burne, LuxS-mediated signaling in Streptococcus mutans is involved in regulation of acid and oxidative stress tolerance and biofilm formation. J Bacteriol, 2004. 186(9): p. 2682-91.
- Wagner, C.T., I.Y. Lu, M.H. Hoffman, W.Q. Sun, J.D. Trent, and J. Connor, T-complex polypeptide-1 interacts with the erythrocyte cytoskeleton in response to elevated temperatures. J Biol Chem, 2004. 279(16): p. 16223-8.
- Thompson, H.G., J.W. Harris, and J.P. Brody, Post-translationally modified S12, absent in transformed breast epithelial cells, is not associated with the 26S proteasome and is induced by proteasome inhibitor. Int J Cancer, 2004. 111(3): p. 338-47.
- Sung, N., K. Takayama, and M.T. Collins, Possible association of GroES and antigen 85 proteins with heat resistance of Mycobacterium paratuberculosis. Appl Environ Microbiol, 2004. 70(3): p. 1688-97.
- Shi, L. and S.M. Paskewitz, Identification and molecular characterization of two immune-responsive chitinase-like proteins from Anopheles gambiae. Insect molecular biology, 2004. 13(4): p. 387-98.
- Prouty, A.M., I.E. Brodsky, J. Manos, R. Belas, S. Falkow, and J.S. Gunn, Transcriptional regulation of Salmonella enterica serovar Typhimurium genes by bile. FEMS immunology and medical microbiology, 2004. 41(2): p. 177-85.
- Omara-Opyene, A.L., P.A. Moura, C.R. Sulsona, J.A. Bonilla, C.A. Yowell, H. Fujioka, D.A. Fidock, and J.B. Dame, Genetic disruption of the Plasmodium falciparum digestive vacuole plasmepsins demonstrates their functional redundancy. J Biol Chem, 2004. 279(52): p. 54088-96.
- Nascimento, M.M., J.A. Lemos, J. Abranches, R.B. Goncalves, and R.A. Burne, Adaptive acid tolerance response of Streptococcus sobrinus. J Bacteriol, 2004. 186(19): p. 6383-90.
- Matarazzo, V. and G.V. Ronnett, Temporal and regional differences in the olfactory proteome as a consequence of MeCP2 deficiency. Proc Natl Acad Sci U S A, 2004. 101(20): p. 7763-8.
- Lee, D.B., N. Jamgotchian, S.G. Allen, F.W. Kan, and I.L. Hale, Annexin A2 heterotetramer: role in tight junction assembly. Am J Physiol Renal Physiol, 2004. 287(3): p. F481-91.
- Kumar, R.N., R. Radhakrishnan, J.H. Ha, and N. Dhanasekaran, Proteome analysis of NIH3T3 cells transformed by activated Galpha12: regulation of leukemia-associated protein SET. J Proteome Res, 2004. 3(6): p. 1177-83.
- Keller, R.K., T.P. Arnold, and S.J. Fliesler, Formation of 7-dehydrocholesterol-containing membrane rafts in vitro and in vivo, with relevance to the Smith-Lemli-Opitz syndrome. J Lipid Res, 2004. 45(2): p. 347-55.
- Kaye, J.Z. and J.A. Baross, Synchronous effects of temperature, hydrostatic pressure, and salinity on growth, phospholipid profiles, and protein patterns of four Halomonas species isolated from deep-sea hydrothermal-vent and sea surface environments. Appl Environ Microbiol, 2004. 70(10): p. 6220-9.
- Jiang, H., K. Fu, and G.K. Andrews, Gene- and cell-type-specific effects of signal transduction cascades on metal-regulated gene transcription appear to be independent of changes in the phosphorylation of metal-response-element-binding transcription factor-1. Biochem J, 2004. 382(Pt 1): p. 33-41.
- Harris, S.P., E. Rostkova, M. Gautel, and R.L. Moss, Binding of myosin binding protein-C to myosin subfragment S2 affects contractility independent of a tether mechanism. Circ Res, 2004. 95(9): p. 930-6.
- Dhodda, V.K., K.A. Sailor, K.K. Bowen, and R. Vemuganti, Putative endogenous mediators of preconditioning-induced ischemic tolerance in rat brain identified by genomic and proteomic analysis. J Neurochem, 2004. 89(1): p. 73-89.
- Coye, L.H. and C.M. Collins, Identification of SpyA, a novel ADP-ribosyltransferase of Streptococcus pyogenes. Molecular microbiology, 2004. 54(1): p. 89-98.
- Besant, P.G., M.V. Lasker, C.D. Bui, E. Tan, P.V. Attwood, and C.W. Turck, Proteomics approach to identifying ATP-covalently modified proteins. Journal of proteome research, 2004. 3(1): p. 120-5.
- Amri, H., W. Li, K. Drieu, and V. Papadopoulos, Identification of the adrenocorticotropin and ginkgolide B-regulated 90-kilodalton protein (p90) in adrenocortical cells as a serotransferrin precursor protein homolog (adrenotransferrin). Endocrinology, 2004. 145(4): p. 1802-9.
- Airo, A., S.L. Chan, Z. Martinez, M.O. Platt, and J.D. Trent, Heat shock and cold shock in Deinococcus radiodurans. Cell Biochem Biophys, 2004. 40(3): p. 277-88.
- Simunovic, V., F.C. Gherardini, and L.J. Shimkets, Membrane localization of motility, signaling, and polyketide synthetase proteins in Myxococcus xanthus. J Bacteriol, 2003. 185(17): p. 5066-75.
- Shah, K., & Shokat, K. M. (2003). A chemical genetic approach for the identification of direct substrates of protein kinases. In Protein Kinase C Protocols (pp. 253-271). Humana Press.
- Schulz, L.C. and J.M. Bahr, Glucose-6-phosphate isomerase is necessary for embryo implantation in the domestic ferret. Proc Natl Acad Sci U S A, 2003. 100(14): p. 8561-6.
- Qureshi, N., P.Y. Perera, J. Shen, G. Zhang, A. Lenschat, G. Splitter, D.C. Morrison, and S.N. Vogel, The proteasome as a lipopolysaccharide-binding protein in macrophages: differential effects of proteasome inhibition on lipopolysaccharide-induced signaling events. J Immunol, 2003. 171(3): p. 1515-25.
- Puschett, J.B., J. Whitbred, M. Ianosi-Irimie, H.V. Vu, E. Rabon, J. Robinson, and P. Deininger, Molecular effects of volume expansion on the renal sodium phosphate cotransporter. Am J Med Sci, 2003. 326(1): p. 1-8.
- Pappano, W.N., B.M. Steiglitz, I.C. Scott, D.R. Keene, and D.S. Greenspan, Use of Bmp1/Tll1 doubly homozygous null mice and proteomics to identify and validate in vivo substrates of bone morphogenetic protein 1/tolloid-like metalloproteinases. Mol Cell Biol, 2003. 23(13): p. 4428-38.
- Meskauskas, A., J.L. Baxter, E.A. Carr, J. Yasenchak, J.E. Gallagher, S.J. Baserga, and J.D. Dinman, Delayed rRNA processing results in significant ribosome biogenesis and functional defects. Mol Cell Biol, 2003. 23(5): p. 1602-13.
- Maguire-Zeiss, K.A. and H.J. Federoff, Convergent pathobiologic model of Parkinson’s disease. Ann N Y Acad Sci, 2003. 991: p. 152-66.
- Ly, C., A.F. Arechiga, J.V. Melo, C.M. Walsh, and S.T. Ong, Bcr-Abl kinase modulates the translation regulators ribosomal protein S6 and 4E-BP1 in chronic myelogenous leukemia cells via the mammalian target of rapamycin. Cancer Res, 2003. 63(18): p. 5716-22.
- Giddings, M.C., A.A. Shah, R. Gesteland, and B. Moore, Genome-based peptide fingerprint scanning. Proc Natl Acad Sci U S A, 2003. 100(1): p. 20-5.
- Dery, K.J., B. Soballe, M.S. Witherspoon, D. Bui, R. Koch, D.J. Sherratt, and M.E. Tolmasky, The aminoglycoside 6′-N-acetyltransferase type Ib encoded by Tn1331 is evenly distributed within the cell’s cytoplasm. Antimicrob Agents Chemother, 2003. 47(9): p. 2897-902.
- Dame, J. B., C. A. Yowell, L. Omara-Opyene, J. M. Carlton, R. A. Cooper, and T. Li,Plasmepsin 4, the food vacuole aspartic proteinase found in all Plasmodium spp. infecting man. Molecular and biochemical parasitology, 2003. 130(1), p. 1-12.
- Coburn, J. and C. Cugini, Targeted mutation of the outer membrane protein P66 disrupts attachment of the Lyme disease agent, Borrelia burgdorferi, to integrin alphavbeta3. Proc Natl Acad Sci U S A, 2003. 100(12): p. 7301-6.
- Clement, P.M., C.A. Henderson, Z.A. Jenkins, Z. Smit-McBride, E.C. Wolff, J.W. Hershey, M.H. Park, and H.E. Johansson, Identification and characterization of eukaryotic initiation factor 5A-2. Eur J Biochem, 2003. 270(21): p. 4254-63.
- Chen, S., W. Samuel, R.N. Fariss, T. Duncan, R.K. Kutty, and B. Wiggert, Differentiation of human retinal pigment epithelial cells into neuronal phenotype by N-(4-hydroxyphenyl)retinamide. J Neurochem, 2003. 84(5): p. 972-81.
- Aggensteiner, M., and G. Reiser, Expression of the brain-specific membrane adapter protein p42IP4/centaurin α, a Ins (1, 3, 4, 5) P4/PtdIns (3, 4, 5) P3 binding protein, in developing rat brain. Developmental brain research, 2003. 142(1), p. 77-87.
- Abranches, J., Y.Y. Chen, and R.A. Burne, Characterization of Streptococcus mutans strains deficient in EIIAB Man of the sugar phosphotransferase system. Appl Environ Microbiol, 2003. 69(8): p. 4760-9.
- Yoo, J.H., Y.S. Yang, I. Choi, Y. Shangguan, I. Song, R.R. Neubig, and J.W. Wiley, Expression of novel splice variants of the G protein subunit, Go alpha, is tissue-specific and age-dependent in the rat. Gene, 2002. 296(1-2): p. 249-55.
- Yang, J. and R.T. Zoeller, Differential display identifies neuroendocrine-specific protein-A (NSP-A) and interferon-inducible protein 10 (IP-10) as ethanol-responsive genes in the fetal rat brain. Brain Res Dev Brain Res, 2002. 138(2): p. 117-33.
- Tian, H., Combinatorial selection of RNA ligands for complex cellular targets : the RNA liagands-based proteomics. Mol Cell Proteomics, 2002. 1(2): p. 99-103.
- Thyagarajan, T. and A.B. Kulkarni, Transforming growth factor-beta1 negatively regulates crystallin expression in teeth. J Bone Miner Res, 2002. 17(9): p. 1710-7.
- Suh, S.J., L.J. Runyen-Janecky, T.C. Maleniak, P. Hager, C.H. MacGregor, N.A. Zielinski-Mozny, P.V. Phibbs, Jr., and S.E. West, Effect of vfr mutation on global gene expression and catabolite repression control of Pseudomonas aeruginosa. Microbiology, 2002. 148(Pt 5): p. 1561-9.
- Srinivasan, S., G.C. Barnard, and T.U. Gerngross, A novel high-cell-density protein expression system based on Ralstonia eutropha. Appl Environ Microbiol, 2002. 68(12): p. 5925-32.
- Shah, K. and K.M. Shokat, A Chemical Genetic Screen for Direct v-Src Substrates Reveals Ordered Assembly of a Retrograde Signaling Pathway. Chem Biol, 2002. 9(1): p. 35-47.
- Sexton, P. S., and R. J. Cenedella, Immunomagnetic capture of lens membrane fractions containing steroid binding protein. Biochemical and biophysical research communications, 2002. 295(4), p. 1027-1031.
- Richfield, E. K., M. J. Thiruchelvam, D.A. Cory-Slechta, C. Wuertzer, R.R. Gainetdinov, M.G. Caron, … and H.J. Federoff. Behavioral and neurochemical effects of wild-type and mutated human α-synuclein in transgenic mice. Experimental neurology, 2002. 175(1), p. 35-48.
- Lizewski, S.E., D.S. Lundberg, and M.J. Schurr, The Transcriptional Regulator AlgR Is Essential for Pseudomonas aeruginosa Pathogenesis. Infect Immun, 2002. 70(11): p. 6083-93.
- Lemos, J.A. and R.A. Burne, Regulation and Physiological Significance of ClpC and ClpP in Streptococcus mutans. J Bacteriol, 2002. 184(22): p. 6357-66.
- Lathem, W.W., T.E. Grys, S.E. Witowski, A.G. Torres, J.B. Kaper, P.I. Tarr, and R.A. Welch, StcE, a metalloprotease secreted by Escherichia coli O157:H7, specifically cleaves C1 esterase inhibitor. Molecular microbiology, 2002. 45(2): p. 277-88.
- King, S.J., M. Bonilla, M.E. Rodgers, and T.A. Schroer, Subunit organization in cytoplasmic dynein subcomplexes. Protein Sci, 2002. 11(5): p. 1239-50.
- Hou, S., H. Guan, and R.P. Ricciardi, In adenovirus type 12 tumorigenic cells, major histocompatibility complex class I transcription shutoff is overcome by induction of NF-kappaB and relief of COUP-TFII repression. J Virol, 2002. 76(7): p. 3212-20.
- Ding, Y.H., S.P. Zhang, J.F. Tomb, and J.G. Ferry, Genomic and proteomic analyses reveal multiple homologs of genes encoding enzymes of the methanol:coenzyme M methyltransferase system that are differentially expressed in methanol- and acetate-grown Methanosarcina thermophila. FEMS Microbiol Lett, 2002. 215(1): p. 127-32.
- Daniotti, J. L., A.R. Zurita, V.M. Trindade, and H.J. Maccioni, GD3 expression in CHO-K1 cells increases growth rate, induces morphological changes, and affects cell-substrate interactions. Neurochemical research, 2002. 27(11), p. 1421-1429.
- Crowley-Weber, C.L., C.M. Payne, M. Gleason-Guzman, G.S. Watts, B. Futscher, C.N. Waltmire, C. Crowley, K. Dvorakova, C. Bernstein, M. Craven, H. Garewal, and H. Bernstein, Development and molecular characterization of HCT-116 cell lines resistant to the tumor promoter and multiple stress-inducer, deoxycholate. Carcinogenesis, 2002. 23(12): p. 2063-80.
- Colello, R.J., B. Fuss, M.A. Fox, and J. Alberti, A proteomic approach to rapidly elucidate oligodendrocyte-associated proteins expressed in the myelinating rat optic nerve. Electrophoresis, 2002. 23(1): p. 144-51.
- Chessler, S.D., W.T. Simonson, I.R. Sweet, and L.P. Hammerle, Expression of the vesicular inhibitory amino acid transporter in pancreatic islet cells: distribution of the transporter within rat islets. Diabetes, 2002. 51(6): p. 1763-71.
- Chen, X., Y. Ding, C.G. Liu, S. Mikhail, and C.S. Yang, Overexpression of glucose-regulated protein 94 (Grp94) in esophageal adenocarcinomas of a rat surgical model and humans. Carcinogenesis, 2002. 23(1): p. 123-30.
- Chakrabarti, D., T. Da Silva, J. Barger, S. Paquette, H. Patel, S. Patterson, and C.M. Allen, Protein farnesyltransferase and protein prenylation in Plasmodium falciparum. J Biol Chem, 2002. 277(44): p. 42066-73.
- Castillo, A.R., J.B. Meehl, G. Morgan, A. Schutz-Geschwender, and M. Winey, The yeast protein kinase Mps1p is required for assembly of the integral spindle pole body component Spc42p. J Cell Biol, 2002. 156(3): p. 453-65.
- Cano, M.I., J.J. Blake, E.H. Blackburn, and N. Agabian, A Trypanosoma brucei Protein Complex That Binds G-overhangs and Co-purifies with Telomerase Activity. J Biol Chem, 2002. 277(2): p. 896-906.
- Cabin, D.E., K. Shimazu, D. Murphy, N.B. Cole, W. Gottschalk, K.L. McIlwain, B. Orrison, A. Chen, C.E. Ellis, R. Paylor, B. Lu, and R.L. Nussbaum, Synaptic vesicle depletion correlates with attenuated synaptic responses to prolonged repetitive stimulation in mice lacking alpha-synuclein. J Neurosci, 2002. 22(20): p. 8797-807.
- Bensing, B.A. and P.M. Sullam, An accessory sec locus of Streptococcus gordonii is required for export of the surface protein GspB and for normal levels of binding to human platelets. Molecular microbiology, 2002. 44(4): p. 1081-94.
- Behnam, K., S.S. Murray, J.P. Whitelegge, and E.J. Brochmann, Identification of the molecular chaperone alpha B-crystallin in demineralized bone powder and osteoblast-like cells. J Orthop Res, 2002. 20(6): p. 1190-6.
- Ansari, A.A., J.D. Fett, R.E. Carraway, A.E. Mayne, N. Onlamoon, and J.B. Sundstrom, Autoimmune mechanisms as the basis for human peripartum cardiomyopathy. Clin Rev Allergy Immunol, 2002. 23(3): p. 301-24.
- Thompson, J., S.A. Robrish, S. Immel, F.W. Lichtenthaler, B.G. Hall, and A. Pikis, Metabolism of sucrose and its five linkage-isomeric alpha-D-glucosyl-D-fructoses by Klebsiella pneumoniae. Participation and properties of sucrose-6-phosphate hydrolase and phospho-alpha-glucosidase. J Biol Chem, 2001. 276(40): p. 37415-25.
- Thykjaer, T., M. Christensen, A.B. Clark, L.R.T. Hansen, T.A., & T.F. Ørntoft, Functional analysis of the mismatch repair system in bladder cancer. British journal of cancer, 2001. 85(4), p. 568-575.
- Tai, A.W., J.Z. Chuang, and C.H. Sung, Cytoplasmic dynein regulation by subunit heterogeneity and its role in apical transport. J Cell Biol, 2001. 153(7): p. 1499-509.
- Raymond, J. A., & C.H. Fritsen, Semipurification and ice recrystallization inhibition activity of ice-active substances associated with Antarctic photosynthetic organisms. Cryobiology, 2001. 43(1), p. 63-70.
- Philip, R., D.W. Darnowski, P.J. Maughan, and L.O. Vodkin, Processing and localization of bovine beta-casein expressed in transgenic soybean seeds under control of a soybean lectin expression cassette. Plant science : an international journal of experimental plant biology, 2001. 161(2): p. 323-335.
- Palace, G. P., P. Lazari, and K. Norton, Analysis of the physicochemical interactions between Clostridium difficile toxins and cholestyramine using liquid chromatography with post-column derivatization. Biochimica et Biophysica Acta (BBA)-Protein Structure and Molecular Enzymology, 2001. 1546(1), p. 171-184.
- Merrell, D.S., C. Bailey, J.B. Kaper, and A. Camilli, The ToxR-mediated organic acid tolerance response of Vibrio cholerae requires OmpU. J Bacteriol, 2001. 183(9): p. 2746-54.
- Liu, X., Z. Feng, N.B. Harris, J.D. Cirillo, H. Bercovier, and R.G. Barletta, Identification of a secreted superoxide dismutase in Mycobacterium avium ssp. paratuberculosis. FEMS microbiology letters, 2001. 202(2): p. 233-8.
- Lemos, J.A., Y.Y. Chen, and R.A. Burne, Genetic and physiologic analysis of the groE operon and role of the HrcA repressor in stress gene regulation and acid tolerance in Streptococcus mutans. J Bacteriol, 2001. 183(20): p. 6074-84.
- Klein, P., E. Glaser, L. Grogan, M. Keane, S. Lipkowitz, P. Soballe, L. Brooks, J. Jenkins, S.M. Steinberg, D.M. DeMarini, and I. Kirsch, Biomarker assays in nipple aspirate fluid. The breast journal, 2001. 7(6): p. 378-87.
- Friedberg, D., M. Midkiff, and J.M. Calvo, Global versus local regulatory roles for Lrp-related proteins: Haemophilus influenzae as a case study. J Bacteriol, 2001. 183(13): p. 4004-11.
- Chen, Z., T.L. Eggerman and A.P. Patterson. Phosphorylation is a regulatory mechanism in apolipoprotein B mRNA editing. Biochemical Journal, 2001. 357(3), pp.661-672.
- Cenedella, R. J., Specific Labeling of Lens Aldehyde Dehydrogenase Class 1 from 3H-Cholesterol or Its Derivatives. Ophthalmic Research, 2001. 33(4), p. 210-216.
- Bocharov, A.V., T.G. Vishnyakova, I.N. Baranova, A.T. Remaley, A.P. Patterson, T.L. Eggerman. Heat shock protein 60 is a high-affinity high-density lipoprotein binding protein. Biochemical and Biophysical Research Communications. 2000 Oct 14;277(1):228-35.
- Zhu, W., D.J. Hunt, A.R. Richardson, and I. Stojiljkovic, Use of heme compounds as iron sources by pathogenic neisseriae requires the product of the hemO gene. J Bacteriol, 2000. 182(2): p. 439-47.
- Sokoloff, A. V., G. Zhang, M.G. Sebestyén, J.A. Wolff, & I. Bock, The interactions of peptides with the innate immune system studied with use of T7 phage peptide display. Molecular Therapy, 2000. 2(2), p. 131-139.
- Pandza, S., M. Baetens, C.H. Park, T. Au, M. Keyhan, and A. Matin, The G-protein FlhF has a role in polar flagellar placement and general stress response induction in Pseudomonas putida. Molecular microbiology, 2000. 36(2): p. 414-23.
- Orihuela, C.J., R. Janssen, C.W. Robb, D.A. Watson, and D.W. Niesel, Peritoneal culture alters Streptococcus pneumoniae protein profiles and virulence properties. Infect Immun, 2000. 68(10): p. 6082-6.
- Murphy, J. P., J. P. McAleer, A. Uglialoro, J. Papile, J. Weniger, F. Bethelmie, and W. A. Tramontano, Histone deacetylase inhibitors and cell proliferation in pea root meristems. Phytochemistry, 2000. 55(1), p. 11-18.
- Mukhopadhyay, B., E.F. Johnson, and R.S. Wolfe, A novel pH2 control on the expression of flagella in the hyperthermophilic strictly hydrogenotrophic methanarchaeaon Methanococcus jannaschii. Proc Natl Acad Sci U S A, 2000. 97(21): p. 11522-7.
- Moylan, T.J. and B.D. Sidell, Concentrations of myoglobin and myoglobin mRNA in heart ventricles from Antarctic fishes. J Exp Biol, 2000. 203(Pt 8): p. 1277-86.
- Moore-Hoon, M.L. and R.J. Turner, The structural unit of the secretory Na+-K+-2Cl- cotransporter (NKCC1) is a homodimer. Biochemistry, 2000. 39(13): p. 3718-24.
- Missios, S., H. C. Davidson, D. Linder, L. Mortimer, A.O. Okobi, and J.S. Doctor, Characterization of cuticular proteins in the red flour beetle, Tribolium castaneum. Insect Biochemistry and Molecular Biology, 2000. 30(1), 47-56.
- Malhotra, S., L.A. Silo-Suh, K. Mathee, and D.E. Ohman, Proteome analysis of the effect of mucoid conversion on global protein expression in Pseudomonas aeruginosa strain PAO1 shows induction of the disulfide bond isomerase, dsbA. J Bacteriol, 2000. 182(24): p. 6999-7006.
- Joyce, E.A., B.L. Bassler, and A. Wright, Evidence for a signaling system in Helicobacter pylori: detection of a luxS-encoded autoinducer. J Bacteriol, 2000. 182(13): p. 3638-43.
- Huebner, R.C., M.A. Gray, J. Holt, X.D. Wu, and J.P. Mays, Characterization of a recombinant outer surface protein A (OspA) vaccine against Lyme disease. Dev Biol (Basel), 2000. 103: p. 163-73.
- Hopkins, T.L., L.J. Krchma, S.A. Ahmad, and K.J. Kramer, Pupal cuticle proteins of Manduca sexta: characterization and profiles during sclerotization. Insect Biochem Mol Biol, 2000. 30(1): p. 19-27.
- Han, E.K., S.K. Tahir, S.P. Cherian, N. Collins, and S.C. Ng, Modulation of paclitaxel resistance by annexin IV in human cancer cell lines. Br J Cancer, 2000. 83(1): p. 83-8.
- Gilmour, R., P. Messner, A.A. Guffanti, R. Kent, A. Scheberl, N. Kendrick, and T.A. Krulwich, Two-dimensional gel electrophoresis analyses of pH-dependent protein expression in facultatively alkaliphilic Bacillus pseudofirmus OF4 lead to characterization of an S-layer protein with a role in alkaliphily. J Bacteriol, 2000. 182(21): p. 5969-81.
- Clark, S. W., and D. I. Meyer, Centractin is an actin homologue associated with the centrosome. Nature, 2000. 359(6392), p. 246-250.
- Chun, J., J. McMaster, Y. Han, A. Schwartz, and S.M. Paskewitz, Two-dimensional gel analysis of haemolymph proteins from Plasmodium-melanizing and -non-melanizing strains of Anopheles gambiae. Insect molecular biology, 2000. 9(1): p. 39-45.
- Carlyon, J.A., D.M. Roberts, M. Theisen, C. Sadler, and R.T. Marconi, Molecular and immunological analyses of the Borrelia turicatae Bdr protein family. Infect Immun, 2000. 68(4): p. 2369-73.
- Bocharov, A. V., T. G. Vishnyakova, I. N. Baranova, A. T. Remaley, A. P. Patterson, and T. L. Eggerman, Heat shock protein 60 is a high-affinity high-density lipoprotein binding protein. Biochemical and Biophysical Research Communications, 2000. 277(1), p. 228-235.
- Binette, J. P., & M. B. Binette, The proteins and the formation of gallstones. Clinica chimica acta, 2000. 296(1-2), p. 59-69.
- Bulik, D.A., P. van Ophem, J.M. Manning, Z. Shen, D.S. Newburg, and E.L. Jarroll, UDP-N-acetylglucosamine pyrophosphorylase, a key enzyme in encysting Giardia, is allosterically regulated. J Biol Chem, 2000. 275(19): p. 14722-8.
- Zhang, M., J. Gong, D.H. Presky, W. Xue, and P.F. Barnes, Expression of the IL-12 receptor beta 1 and beta 2 subunits in human tuberculosis. J Immunol, 1999. 162(4): p. 2441-7.
- van Velkinburgh, J.C. and J.S. Gunn, PhoP-PhoQ-regulated loci are required for enhanced bile resistance in Salmonella spp. Infect Immun, 1999. 67(4): p. 1614-22.
- Topham, P.S., H. Kawachi, S.A. Haydar, S. Chugh, T.A. Addona, K.B. Charron, L.B. Holzman, M. Shia, F. Shimizu, and D.J. Salant, Nephritogenic mAb 5-1-6 is directed at the extracellular domain of rat nephrin. J Clin Invest, 1999. 104(11): p. 1559-66.
- Saunders, P.A., R.W. Chen, and D.M. Chuang, Nuclear translocation of glyceraldehyde-3-phosphate dehydrogenase isoforms during neuronal apoptosis. J Neurochem, 1999. 72(3): p. 925-32.
- Salas, P.J., Insoluble gamma-tubulin-containing structures are anchored to the apical network of intermediate filaments in polarized CACO-2 epithelial cells. J Cell Biol, 1999. 146(3): p. 645-58.
- Millar, S. E., K. Willert, P.C. Salinas, H. Roelink, R. Nusse, D.J. Sussman, and G.S. Barsh, WNT signaling in the control of hair growth and structure. Developmental biology, 1999. 207(1), p. 133-149.
- Memili, E. and N.L. First, Control of gene expression at the onset of bovine embryonic development. Biol Reprod, 1999. 61(5): p. 1198-207.
- Marden, J.H., G.H. Fitzhugh, M.R. Wolf, K.D. Arnold, and B. Rowan, Alternative splicing, muscle calcium sensitivity, and the modulation of dragonfly flight performance. Proc Natl Acad Sci U S A, 1999. 96(26): p. 15304-9.
- Kushner, D.B. and R.P. Ricciardi, Reduced phosphorylation of p50 is responsible for diminished NF-kappaB binding to the major histocompatibility complex class I enhancer in adenovirus type 12-transformed cells. Mol Cell Biol, 1999. 19(3): p. 2169-79.
- Kerekatte, V., B.D. Keiper, C. Badorff, A. Cai, K.U. Knowlton, and R.E. Rhoads, Cleavage of Poly(A)-binding protein by coxsackievirus 2A protease in vitro and in vivo: another mechanism for host protein synthesis shutoff? J Virol, 1999. 73(1): p. 709-17.
- Izaguirre, G., L. Aguirre, P. Ji, B. Aneskievich, and B. Haimovich, Tyrosine phosphorylation of alpha-actinin in activated platelets. J Biol Chem, 1999. 274(52): p. 37012-20.
- Estellés, A., C.A. Charlton, & H.M. Blau, The phosphoprotein protein PEA-15 inhibits Fas-but increases TNF-R1-mediated caspase-8 activity and apoptosis. Developmental biology, 1999. 216(1), p. 16-28.
- Cenedella, R.J. and G. Chandrasekher, Intense myristoylation of a single protein in the ocular lens. Biochem Biophys Res Commun, 1999. 256(3): p. 652-6.
- Yao, P.J. and P.D. Coleman, Reduction of O-linked N-acetylglucosamine-modified assembly protein-3 in Alzheimer’s disease. J Neurosci, 1998. 18(7): p. 2399-411.
- McAtee, C.P., M.Y. Lim, K. Fung, M. Velligan, K. Fry, T. Chow, and D.E. Berg, Identification of potential diagnostic and vaccine candidates of Helicobacter pylori by two-dimensional gel electrophoresis, sequence analysis, and serum profiling. Clin Diagn Lab Immunol, 1998. 5(4): p. 537-42.
- Lin, Y., M. Zhang, and P.F. Barnes, Chemokine production by a human alveolar epithelial cell line in response to Mycobacterium tuberculosis. Infect Immun, 1998. 66(3): p. 1121-6.
- Lelkes, P. I., D.L. Galvan, G. Thomas Hayman, T.J. Goodwin, D.Y. Chatman, S. Cherian, … & B.R. Unsworth, Simulated microgravity conditions enhance differentiation of cultured PC12 cells towards the neuroendocrine phenotype. In Vitro Cellular & Developmental Biology-Animal, 1998. 34(4), p. 316-325.
- Kubota, S., K. Gunji, B.A. Ackrell, B. Cochran, C. Stolarski, S. Wengrowicz, J.S. Kennerdell, Y. Hiromatsu, and J. Wall, The 64-kilodalton eye muscle protein is the flavoprotein subunit of mitochondrial succinate dehydrogenase: the corresponding serum antibodies are good markers of an immune-mediated damage to the eye muscle in patients with Graves’ hyperthyroidism. J Clin Endocrinol Metab, 1998. 83(2): p. 443-7.
- Gouveia, S., M.E. Proctor, M.S. Lee, J.B. Luchansky, and C.W. Kaspar, Genomic comparisons and Shiga toxin production among Escherichia coli O157:H7 isolates from a day care center outbreak and sporadic cases in southeastern Wisconsin. J Clin Microbiol, 1998. 36(3): p. 727-33.
- Gerberding, S.J. and C.H. Byers, Preparative ion-exchange chromatography of proteins from dairy whey. Journal of chromatography. A, 1998. 808(1-2): p. 141-51.
- Burns, J. A., K. J. Kreder, D. M. Lubaroff, and W. A. See, Alterations in constituent urinary proteins in response to bladder outlet obstruction in rats. The Journal of urology, 1998. 159(5), p. 1747-1751.
- Batuman, V., P.J. Verroust, G.L. Navar, J.H. Kaysen, F.O. Goda, W.C. Campbell, E. Simon, F. Pontillon, M. Lyles, J. Bruno, and T.G. Hammond, Myeloma light chains are ligands for cubilin (gp280). Am J Physiol, 1998. 275(2 Pt 2): p. F246-54.
- Han, C. J., S.H. Park, and R.M. Kelly, Acquired thermotolerance and stressed-phase growth of the extremely thermoacidophilic archaeon Metallosphaera sedula in continuous culture. Applied and environmental microbiology, 1997. 63(6), p. 2391-2396.
- Bichko, V., S. Barik, and J. Taylor, Phosphorylation of the hepatitis delta virus antigens. Journal of virology, 1997. 71(1): p. 512-8.
- Amri, H., K. Drieu, and V. Papadopoulos, Ex vivo regulation of adrenal cortical cell steroid and protein synthesis, in response to adrenocorticotropic hormone stimulation, by the Ginkgo biloba extract EGb 761 and isolated ginkgolide B. Endocrinology, 1997. 138(12): p. 5415-26.
- Thomas, C. E., & P. F. Sparling. Isolation and analysis of a fur mutant of Neisseria gonorrhoeae. Journal of bacteriology, 1996. 178(14), p. 4224-4232.
- Steinberg, T. H., R. P. Haugland, and V. L. Singer, Applications of SYPRO orange and SYPRO red protein gel stains. Analytical biochemistry, 1996. 239(2), p. 238-245.
- Donat, T.L., W. Sakr, J.E. Lehr, K.J. Pienta. Unique nuclear matrix protein alterations in head and neck squamous cell carcinomas: intermediate biomarker candidates. Otolaryngology–Head and Neck Surgery. 1996 Mar;114(3):387-93.
- Binette, J. P., Binette, M. B., Gawinowicz, M. A., & Kendrick, N. (1996). Urinary stone proteins: an update. Scanning microscopy, 10(2), 18.
- Tsonis, P.A. and K. Del Rio-Tsonis, Protein separation techniques in the study of tissue regeneration. J Chromatogr A, 1995. 698(1-2): p. 361-7.
- Shen, D.W., S. Akiyama, P. Schoenlein, I. Pastan, and M.M. Gottesman, Characterisation of high-level cisplatin-resistant cell lines established from a human hepatoma cell line and human KB adenocarcinoma cells: cross-resistance and protein changes. British journal of cancer, 1995. 71(4): p. 676-83.
- Muthuchamy, M., I.L. Grupp, G. Grupp, B.A. O’Toole, A.B. Kier, G.P. Boivin, J. Neumann, and D.F. Wieczorek, Molecular and physiological effects of overexpressing striated muscle beta-tropomyosin in the adult murine heart. J Biol Chem, 1995. 270(51): p. 30593-603.
- McCarthy, S. A., Samuels, M. L., Pritchard, C. A., Abraham, J. A., & McMahon, M. (1995). Rapid induction of heparin-binding epidermal growth factor/diphtheria toxin receptor expression by Raf and Ras oncogenes. Genes & development, 9(16), 1953-1964.
- Manolopoulos, V. G., J. D. Liu, B. R. Unsworth, and P. I. Lelkes, Adenylyl Cyclase Isoforms Are Differentially Expressed in Primary Cultures of Endothelial Cells and Whole Tissue-Homogenates from Various Rat Tissues. Biochemical and biophysical research communications, 1995. 208(1), p. 323-331.
- Lelivelt, M.J. and T.H. Kawula, Hsc66, an Hsp70 homolog in Escherichia coli, is induced by cold shock but not by heat shock. J Bacteriol, 1995. 177(17): p. 4900-7.
- Kirchner, J., C.M. Connolly, and S.B. Sandmeyer, Requirement of RNA polymerase III transcription factors for in vitro position-specific integration of a retroviruslike element. Science, 1995. 267(5203): p. 1488-91.
- Friedman, S. M., M. Malik, and K. Drlica, DNA supercoiling in a thermotolerant mutant of Escherichia coli. Molecular and General Genetics MGG, 1995. 248(4): p. 417-422.
- Dickens, J. C., F.E. Callahan, W.P. Wergin, & E. F. Erbe,Olfaction in a hemimetabolous insect: antennal-specific protein in adult Lygus lineolaris (Heteroptera: Miridae). Journal of Insect Physiology, 1995. 41(10): p. 857-867.
- Brown, K., S. Gerstberger, L. Carlson, G. Franzoso, and U. Siebenlist, Control of I kappa B-alpha proteolysis by site-specific, signal-induced phosphorylation. Science, 1995. 267(5203): p. 1485-8.
- Vidugiriene, J., and A. K. Menon, The GPI anchor of cell-surface proteins is synthesized on the cytoplasmic face of the endoplasmic reticulum. The Journal of cell biology, 1994. 127(2): p. 333-341.
- Perry, S.E. and K. Keegstra, Envelope membrane proteins that interact with chloroplastic precursor proteins. Plant Cell, 1994. 6(1): p. 93-105.
- Mooradian, A. D., J. L. Pinnas, C. C. Lung, M. D. Yahya, and K. Meredith, Diabetes-related changes in the protein composition of rat cerebral microvessels. Neurochemical research, 1994. 19(2), p. 123-128.
- Mohammad, R.M., K. Vistisen, and A. al-Katib, Protein study of T and B acute lymphoblastic leukemia cell lines. Electrophoresis, 1994. 15(8-9): p. 1218-24.
- Mohammad, R.M., A. Maki, K. Vistisen, and A. al-Katib, Protein studies of human non-Hodgkin’s B-lymphoma: appraisal by two-dimensional gel electrophoresis. Electrophoresis, 1994. 15(12): p. 1566-72.
- Mohammad, R.M., M.Y. Hamdan, and A. al-Katib, Induced expression of alpha-enolase in differentiated diffuse large cell lymphoma. Enzyme Protein, 1994. 48(1): p. 37-44.
- Mobley, P. L., K. Hedberg, L. Bonin, B. Chen, and O. H. Griffith, Decreased phosphorylation of four 20-kDa proteins precedes staurosporine-induced disruption of the actin/myosin cytoskeleton in rat astrocytes. Experimental cell research, 1994. 214(1), p. 55-66.
- Macoska, J., C.N. Hoover, and K.J. Pienta, Alterations in cellular gene expression without changes in nuclear matrix protein content. Journal of cellular biochemistry, 1994. 56(4): p. 502-9.
- Luo, X.N., B. Mookerjee, A. Ferrari, S. Mistry, and G.F. Atweh, Regulation of phosphoprotein p18 in leukemic cells. Cell cycle regulated phosphorylation by p34cdc2 kinase. J Biol Chem, 1994. 269(14): p. 10312-8.
- Kendrick, N.C., J.J. Johansen, P.R. Lee, and D.A. Santek, Optimization of an HP Scanjet for quantification of protein electrophoresis gels. Anal Biochem, 1994. 219(2): p. 297-304.
- Keesee, S.K., M.D. Meneghini, R.P. Szaro, and Y.J. Wu, Nuclear matrix proteins in human colon cancer. Proc Natl Acad Sci U S A, 1994. 91(5): p. 1913-6.
- Lelkes, P. I., E. M. Ramos, D. M. Chick, J. Liu, and B. R. Unsworth, Microgravity decreases tyrosine hydroxylase expression in rat adrenals. The FASEB journal, 1994. 8(14), p. 1177-1182.
- Hedberg, K.K., G.B. Birrell, P.L. Mobley, and O.H. Griffith, Transition metal chelator TPEN counteracts phorbol ester-induced actin cytoskeletal disruption in C6 rat glioma cells without inhibiting activation or translocation of protein kinase C. Journal of cellular physiology, 1994. 158(2): p. 337-46.
- Hasler-Rapacz, J.O., T.C. Nichols, T.R. Griggs, D.A. Bellinger, and J. Rapacz, Familial and diet-induced hypercholesterolemia in swine. Lipid, ApoB, and ApoA-I concentrations and distributions in plasma and lipoprotein subfractions. Arterioscler Thromb, 1994. 14(6): p. 923-30.
- Harakeh, S., A. Niedzwiecki, and R. J, Jariwalla, Mechanistic aspects of ascorbate inhibition of human immunodeficiency virus. Chemico-biological interactions, 1994. 91(2-3), p. 207-215.
- Hammond, T.G., P.J. Verroust, R.R. Majewski, K.E. Muse, and T.D. Oberley, Heavy endosomes isolated from the rat renal cortex show attributes of intermicrovillar clefts. Am J Physiol, 1994. 267(4 Pt 2): p. F516-27.
- Hammond, T.G. and P.J. Verroust, Heterogeneity of endosomal populations in the rat renal cortex: light endosomes. Am J Physiol, 1994. 266(6 Pt 1): p. C1783-94.
- Boom, W. H., K. N. Balaji, R. Nayak, K. Tsukaguchi, and K. A. Chervenak, Characterization of a 10-to 14-kilodalton protease-sensitive Mycobacterium tuberculosis H37Ra antigen that stimulates human gamma delta T cells. Infection and immunity, 1994. 62(12), p. 5511-5518.
- Bleck, G.T. and R.D. Bremel, Variation in expression of a bovine alpha-lactalbumin transgene in milk of transgenic mice. J Dairy Sci, 1994. 77(7): p. 1897-904.
- Blank, M., O. Khorkova, and R. Goodman, Changes in polypeptide distribution stimulated by different levels of electromagnetic and thermal stress. Bioelectrochemistry and Bioenergetics, 1994. 33(2), p. 109-114.
- Binette, J. P., and M.B. Binette, M. B., Sequencing of proteins extracted from stones. Scanning Microscopy, 1994. 8(2): p. 9.
- Wright, L. S., K. A. Finn, and F. L. Siegel, Concomitant preparative isolation of calmodulin and heat shock protein (hsp90) from bovine testes. Protein Expression and Purification, 1993. 4(5), p. 417-424.
- Wiley, S. R., R.J. Kraus, F. Zuo, E.E. Murray, K. Loritz, and J.E. Mertz, SV40 early-to-late switch involves titration of cellular transcriptional repressors. Genes & development, 1993. 7(11), p. 2206-2219.
- Slobin, L.I. and M.N. Rao, Translational repression of EF-1 alpha mRNA in vitro. Eur J Biochem, 1993. 213(3): p. 919-26.
- Khanuja, P.S., J.E. Lehr, H.D. Soule, S.K. Gehani, A.C. Noto, S. Choudhury, R. Chen, and K.J. Pienta, Nuclear matrix proteins in normal and breast cancer cells. Cancer Res, 1993. 53(14): p. 3394-8.
- Bottalico, L.A., N.C. Kendrick, A. Keller, Y. Li, and I. Tabas, Cholesteryl ester loading of mouse peritoneal macrophages is associated with changes in the expression or modification of specific cellular proteins, including increase in an alpha-enolase isoform. Arteriosclerosis and thrombosis : a journal of vascular biology / American Heart Association, 1993. 13(2): p. 264-75.
- Blank, M., O. Khorkova, and R. Goodman, Similarities in the proteins synthesized by Sciara salivary gland cells in response to electromagnetic fields and to heat shock. Bioelectrochemistry and bioenergetics, 1993. 31(1), p. 27-38.
- Wadsworth, C. L., M. W. Knuth, L. W. Burrus, B. B. Olwin, and R. L. Niece, Reusing PVDF electroblotted protein samples after N-terminal sequencing to obtain unique internal amino acid sequence. Techniques in Protein Chemistry III, 1992. p. 61-68.
- Myers, C.L., S.N. Desai, J. Schembri-King, G.L. Letts, and R.W. Wallace, Discriminatory effects of protein kinase inhibitors and calcium ionophore on endothelial ICAM-1 induction. Am J Physiol, 1992. 262(2 Pt 1): p. C365-73.
- Lees-Miller, J.P., D.M. Helfman, and T.A. Schroer, A vertebrate actin-related protein is a component of a multisubunit complex involved in microtubule-based vesicle motility. Nature, 1992. 359(6392): p. 244-6.
- Burgess-Cassler, A., J.J. Johansen, and N.C. Kendrick, Two-dimensional gel analysis of serum apolipoprotein A-I isoforms: preliminary analysis suggests altered ratios in individuals with heart disease. Appl Theor Electrophor, 1992. 3(1): p. 41-5.
- Niedzwiecki, A., A.M. Kongpachith, and J.E. Fleming, Aging affects expression of 70-kDa heat shock proteins in Drosophila. J Biol Chem, 1991. 266(14): p. 9332-8.
- Lee, K. J., and G. S. Heo, Free solution capillary electrophoresis of proteins using untreated fused-silica capillaries. Journal of Chromatography A, 1991. 559(1-2), p. 317-324.
- Heitz, D., F. Rousseau, D. Devys, S. Saccone, H. Abderrahim, D. Le Paslier, D. Cohen, A. Vincent, D. Toniolo, G. Della Valle, and et al., Isolation of sequences that span the fragile X and identification of a fragile X-related CpG island. Science, 1991. 251(4998): p. 1236-9.
- Cunningham, C.C., T.P. Stossel, and D.J. Kwiatkowski, Enhanced motility in NIH 3T3 fibroblasts that overexpress gelsolin. Science, 1991. 251(4998): p. 1233-6.
- Poernama, F., S.A. Schreyer, J.J. Bitgood, M.E. Cook, and A.D. Attie, Spontaneous high density lipoprotein deficiency syndrome associated with a Z-linked mutation in chickens. J Lipid Res, 1990. 31(6): p. 955-63.
- Miller, D.J., M.A. Winer, and R.L. Ax, Heparin-binding proteins from seminal plasma bind to bovine spermatozoa and modulate capacitation by heparin. Biol Reprod, 1990. 42(5-6): p. 899-915.
- Sammons, D. W., N. Pan, K. H. Kwan, W. J. Ko, N. H. Lin, Y. M. Fong, … & R. W. Knowles, Computerized Analysis of 2-D Gel Patterns of the HLA Class II Antigens. Immunobiology of HLA, 1989. p. 427-437.
- Panjwani, N., J. Drysdale, B. Clark, J. Alberta, and J. Baum, Protein-related abnormalities in keratoconus. Invest Ophthalmol Vis Sci, 1989. 30(12): p. 2481-7.
- Burgess-Cassler, A., J.J. Johansen, D.A. Santek, J.R. Ide, and N.C. Kendrick, Computerized quantitative analysis of coomassie-blue-stained serum proteins separated by two-dimensional electrophoresis. Clin Chem, 1989. 35(12): p. 2297-304.
- Burgess-Cassler, A., J.J. Johansen, and N. Kendrick, Immunodepletion of albumin from human serum samples. Clin Chim Acta, 1989. 183(3): p. 359-65.
- Pierce, E.A., M.C. Dame, and H.F. DeLuca, Size and charge of the functional 1,25-dihydroxyvitamin D receptor in porcine intestine. J Biol Chem, 1987. 262(35): p. 17092-9.
- Yatvin, M.B., K.M. Smith, and F.L. Siegel, Translocation of nascent non-signal sequence protein in heated Escherichia coli. J Biol Chem, 1986. 261(17): p. 8070-5.
- Griep, A., N.C. Kendrick, and H.F. DeLuca, Modulation of protein biosynthesis during early stages of differentiation in retinoic acid treated F9 teratocarcinoma cells. Arch Biochem Biophys, 1986. 249(1): p. 180-90.
- Bishop, C.W., N.C. Kendrick, D.A. Santek, R.G. Thompson, and H.F. DeLuca, Computer analysis of double-labeled two-dimensional electrophoresis gels. Analytical biochemistry, 1985. 148(1): p. 133-48.
- Bishop, C.W., N.C. Kendrick, M.C. Dame, and H.F. DeLuca, 1 alpha,25-Dihydroxyvitamin D-induced modification of a cytosolic protein in embryonic chick intestine. J Biol Chem, 1985. 260(9): p. 5209-12.
- Saari, L.L., E.W. Triplett, and P.W. Ludden, Purification and properties of the activating enzyme for iron protein of nitrogenase from the photosynthetic bacterium Rhodospirillum rubrum. J Biol Chem, 1984. 259(24): p. 15502-8.
- Lowndes, J.M., M. Hokin-Neaverson, and A.E. Ruoho, Photoaffinity labeling of (Na+K+)-ATPase with [125I]iodoazidocymarin. J Biol Chem, 1984. 259(16): p. 10533-8.
- Kendrick, N.C., C.W. Bishop, and H.F. DeLuca, Multiple forms of vitamin D-dependent calcium-binding protein in rat kidney. J Biol Chem, 1984. 259(20): p. 12691-5.
- Bishop, C.W., N.C. Kendrick, and H.F. DeLuca, The early time course of calcium-binding protein induction by 1,25- dihydroxyvitamin D3 as determined by computer analysis of two- dimensional electrophoresis gels. J Biol Chem, 1984. 259(5): p. 3355-60.
- Sparrow, C.P. and C.R. Raetz, A trans-acting regulatory mutation that causes overproduction of phosphatidylserine synthase in Escherichia coli. J Biol Chem, 1983. 258(16): p. 9963-7.
- Bishop, C.W., N.C. Kendrick, and H.F. DeLuca, Induction of calcium-binding protein before 1,25-dihydroxyvitamin D3 stimulation of duodenal calcium uptake. The Journal of biological chemistry, 1983. 258(2): p. 1305-10.